7 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Sumo1.S	Ubiquitin-like domain-containing protein. (141 aa)
	Sumo1.L	Ubiquitin-like domain-containing protein. (148 aa)
	Uba1.S	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family. (1044 aa)
	Fancm.L	Uncharacterized protein. (2165 aa)
	fancd2	Uncharacterized protein. (1445 aa)
	fanci	Uncharacterized protein. (1337 aa)
	ube2t	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (192 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fancm.L	Sumo1.L	A0A1L8F9Q1	A0A1L8EWZ5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.529
Fancm.L	Sumo1.S	A0A1L8F9Q1	A0A1L8EPQ0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.529
Fancm.L	fancd2	A0A1L8F9Q1	A0A1L8GP71	Uncharacterized protein.	Uncharacterized protein.	0.999
Fancm.L	fanci	A0A1L8F9Q1	A0A1L8H0X8	Uncharacterized protein.	Uncharacterized protein.	0.999
Fancm.L	ube2t	A0A1L8F9Q1	A0A1L8H703	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.992
Sumo1.L	Fancm.L	A0A1L8EWZ5	A0A1L8F9Q1	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.529
Sumo1.L	Uba1.S	A0A1L8EWZ5	A0A1L8EZK6	Ubiquitin-like domain-containing protein.	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.	0.818
Sumo1.L	fancd2	A0A1L8EWZ5	A0A1L8GP71	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.476
Sumo1.L	fanci	A0A1L8EWZ5	A0A1L8H0X8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.402
Sumo1.L	ube2t	A0A1L8EWZ5	A0A1L8H703	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.711
Sumo1.S	Fancm.L	A0A1L8EPQ0	A0A1L8F9Q1	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.529
Sumo1.S	Uba1.S	A0A1L8EPQ0	A0A1L8EZK6	Ubiquitin-like domain-containing protein.	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.	0.818
Sumo1.S	fancd2	A0A1L8EPQ0	A0A1L8GP71	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.476
Sumo1.S	fanci	A0A1L8EPQ0	A0A1L8H0X8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.402
Sumo1.S	ube2t	A0A1L8EPQ0	A0A1L8H703	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.711
Uba1.S	Sumo1.L	A0A1L8EZK6	A0A1L8EWZ5	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.	Ubiquitin-like domain-containing protein.	0.818
Uba1.S	Sumo1.S	A0A1L8EZK6	A0A1L8EPQ0	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.	Ubiquitin-like domain-containing protein.	0.818
Uba1.S	fancd2	A0A1L8EZK6	A0A1L8GP71	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.	Uncharacterized protein.	0.475
Uba1.S	fanci	A0A1L8EZK6	A0A1L8H0X8	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.	Uncharacterized protein.	0.489
Uba1.S	ube2t	A0A1L8EZK6	A0A1L8H703	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.952