57 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8HTA9	Uncharacterized protein. (3120 aa)
	Nfatc2.S	RHD domain-containing protein. (884 aa)
	A0A1L8EM88	Uncharacterized protein. (445 aa)
	Axin1.S	Uncharacterized protein. (839 aa)
	nfatc2	RHD domain-containing protein. (896 aa)
	A0A1L8EVW1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (958 aa)
	A0A1L8EZY9	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (433 aa)
	Klc1.L	Uncharacterized protein. (811 aa)
	abl1	Tyrosine-protein kinase. (1122 aa)
	Irs4.S	Uncharacterized protein. (1088 aa)
	Was.S	Uncharacterized protein. (472 aa)
	Was.L	Uncharacterized protein. (471 aa)
	irs4	Uncharacterized protein. (1077 aa)
	klc1	Uncharacterized protein. (625 aa)
	psen1	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (433 aa)
	A0A1L8FER1	Uncharacterized protein. (915 aa)
	gsk3a	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (424 aa)
	A0A1L8FJQ1	Uncharacterized protein. (919 aa)
	stmn2	Stathmin; Belongs to the stathmin family. (178 aa)
	wasf1	WH2 domain-containing protein. (561 aa)
	stmn4	Stathmin; Belongs to the stathmin family. (185 aa)
	wasf1-2	WH2 domain-containing protein. (553 aa)
	Irs1.S	Uncharacterized protein. (1227 aa)
	wasll	Uncharacterized protein. (412 aa)
	nfatc3	RHD domain-containing protein. (885 aa)
	hkdc1	Uncharacterized protein. (916 aa)
	A0A1L8GUZ3	Uncharacterized protein. (915 aa)
	Gria1.L	Uncharacterized protein. (902 aa)
	Dpysl3.S	Amidohydro-rel domain-containing protein. (571 aa)
	Hk2.L	Uncharacterized protein. (915 aa)
	A0A1L8GXW5	Phosphotransferase. (610 aa)
	hkdc1-2	Uncharacterized protein. (916 aa)
	tfeb	BHLH domain-containing protein. (435 aa)
	Stmn1.S	Uncharacterized protein. (242 aa)
	Rps6kb1.S	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (525 aa)
	A0A1L8H9U2	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1028 aa)
	App.L	BPTI/Kunitz inhibitor domain-containing protein. (749 aa)
	stmn1	Stathmin; Belongs to the stathmin family. (145 aa)
	rps6kb1	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (521 aa)
	A0A1L8HMD5	Alpha-synuclein; Belongs to the synuclein family. (212 aa)
	A0A1L8HMU9	Tr-type G domain-containing protein. (846 aa)
	bcr	Uncharacterized protein. (1160 aa)
	map1b	Uncharacterized protein. (2247 aa)
	A0A1L8HS12	Tr-type G domain-containing protein. (847 aa)
	Bcr.L	Uncharacterized protein. (1180 aa)
	map1b-2	Uncharacterized protein. (2255 aa)
	A0A1L8I2U3	Tr-type G domain-containing protein. (859 aa)
	nf-at	Nuclear factor of activated T-cell. (884 aa)
	LOC398006	Tyrosine-protein kinase receptor. (1362 aa)
	stmn3	Stathmin; Belongs to the stathmin family. (180 aa)
	ctnnb1	Beta-catenin protein. (781 aa)
	stmn2-2	Stathmin; Belongs to the stathmin family. (178 aa)
	hk1	Hk1-A protein. (916 aa)
	snca	Alpha-synuclein; Belongs to the synuclein family. (141 aa)
	eef2.1	Eef2-prov protein. (858 aa)
	stmn3-2	Stathmin; Belongs to the stathmin family. (180 aa)
	creb1	Creb1-prov protein. (324 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EM88	A0A1L8HMD5	A0A1L8EM88	A0A1L8HMD5	Uncharacterized protein.	Alpha-synuclein; Belongs to the synuclein family.	0.457
A0A1L8EM88	A0A1L8HTA9	A0A1L8EM88	A0A1L8HTA9	Uncharacterized protein.	Uncharacterized protein.	0.444
A0A1L8EM88	map1b	A0A1L8EM88	A0A1L8HRF3	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A1L8EM88	map1b-2	A0A1L8EM88	A0A1L8I219	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A1L8EM88	snca	A0A1L8EM88	Q7SZ02	Uncharacterized protein.	Alpha-synuclein; Belongs to the synuclein family.	0.421
A0A1L8EM88	tfeb	A0A1L8EM88	A0A1L8H6Y2	Uncharacterized protein.	BHLH domain-containing protein.	0.695
A0A1L8EVW1	Klc1.L	A0A1L8EVW1	A0A1L8F045	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.988
A0A1L8EVW1	klc1	A0A1L8EVW1	A0A1L8FA06	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.989
A0A1L8EZY9	A0A1L8HMD5	A0A1L8EZY9	A0A1L8HMD5	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Alpha-synuclein; Belongs to the synuclein family.	0.586
A0A1L8EZY9	A0A1L8HTA9	A0A1L8EZY9	A0A1L8HTA9	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Uncharacterized protein.	0.700
A0A1L8EZY9	App.L	A0A1L8EZY9	A0A1L8HCN6	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	BPTI/Kunitz inhibitor domain-containing protein.	0.964
A0A1L8EZY9	ctnnb1	A0A1L8EZY9	Q63ZT4	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Beta-catenin protein.	0.986
A0A1L8EZY9	gsk3a	A0A1L8EZY9	A0A1L8FGT4	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.587
A0A1L8EZY9	psen1	A0A1L8EZY9	A0A1L8FAH5	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.900
A0A1L8EZY9	snca	A0A1L8EZY9	Q7SZ02	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Alpha-synuclein; Belongs to the synuclein family.	0.614
A0A1L8FER1	A0A1L8FJQ1	A0A1L8FER1	A0A1L8FJQ1	Uncharacterized protein.	Uncharacterized protein.	0.604
A0A1L8FER1	A0A1L8GUZ3	A0A1L8FER1	A0A1L8GUZ3	Uncharacterized protein.	Uncharacterized protein.	0.607
A0A1L8FER1	A0A1L8GXW5	A0A1L8FER1	A0A1L8GXW5	Uncharacterized protein.	Phosphotransferase.	0.620
A0A1L8FER1	Hk2.L	A0A1L8FER1	A0A1L8GXW0	Uncharacterized protein.	Uncharacterized protein.	0.607
A0A1L8FER1	hk1	A0A1L8FER1	Q6GQB4	Uncharacterized protein.	Hk1-A protein.	0.602