13 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pxn	Uncharacterized protein; Belongs to the paxillin family. (542 aa)
	A0A1L8FPG7	Uncharacterized protein. (234 aa)
	calm1	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	calml4	Uncharacterized protein. (153 aa)
	A0A1L8GTE5	Uncharacterized protein. (2543 aa)
	A0A1L8H034	Uncharacterized protein. (2543 aa)
	calml4-2	Uncharacterized protein. (152 aa)
	mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (361 aa)
	Mapk1.L	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (361 aa)
	A0A1L8I385	Uncharacterized protein. (2303 aa)
	Tln2.S	Uncharacterized protein. (2612 aa)
	actl6a	Baf53a-pending-prov protein; Belongs to the actin family. (429 aa)
	pxn-2	LOC397826 protein; Belongs to the paxillin family. (539 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8GTE5	actl6a	A0A1L8GTE5	Q7ZYI5	Uncharacterized protein.	Baf53a-pending-prov protein; Belongs to the actin family.	0.959
A0A1L8GTE5	calm1	A0A1L8GTE5	A0A1L8G5X8	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.563
A0A1L8GTE5	pxn	A0A1L8GTE5	A0A1L8I058	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.997
A0A1L8GTE5	pxn-2	A0A1L8GTE5	Q9I957	Uncharacterized protein.	LOC397826 protein; Belongs to the paxillin family.	0.997
A0A1L8H034	actl6a	A0A1L8H034	Q7ZYI5	Uncharacterized protein.	Baf53a-pending-prov protein; Belongs to the actin family.	0.968
A0A1L8H034	calm1	A0A1L8H034	A0A1L8G5X8	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.562
A0A1L8H034	pxn	A0A1L8H034	A0A1L8I058	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.997
A0A1L8H034	pxn-2	A0A1L8H034	Q9I957	Uncharacterized protein.	LOC397826 protein; Belongs to the paxillin family.	0.997
A0A1L8I385	actl6a	A0A1L8I385	Q7ZYI5	Uncharacterized protein.	Baf53a-pending-prov protein; Belongs to the actin family.	0.969
A0A1L8I385	calm1	A0A1L8I385	A0A1L8G5X8	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.567
A0A1L8I385	pxn	A0A1L8I385	A0A1L8I058	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.997
A0A1L8I385	pxn-2	A0A1L8I385	Q9I957	Uncharacterized protein.	LOC397826 protein; Belongs to the paxillin family.	0.997
Mapk1.L	actl6a	A0A1L8I0W2	Q7ZYI5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Baf53a-pending-prov protein; Belongs to the actin family.	0.502
Mapk1.L	calm1	A0A1L8I0W2	A0A1L8G5X8	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein; Belongs to the calmodulin family.	0.536
Mapk1.L	mapk1	A0A1L8I0W2	A0A1L8HQD8	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.900
Mapk1.L	pxn	A0A1L8I0W2	A0A1L8I058	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein; Belongs to the paxillin family.	0.423
Mapk1.L	pxn-2	A0A1L8I0W2	Q9I957	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	LOC397826 protein; Belongs to the paxillin family.	0.423
Tln2.S	actl6a	A0A310UCZ7	Q7ZYI5	Uncharacterized protein.	Baf53a-pending-prov protein; Belongs to the actin family.	0.969
Tln2.S	calm1	A0A310UCZ7	A0A1L8G5X8	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.554
Tln2.S	pxn	A0A310UCZ7	A0A1L8I058	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.997