21 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Marveld3.L	MARVEL domain-containing protein. (215 aa)
	f11r	LOC398627 protein. (291 aa)
	pard6b	Uncharacterized protein. (377 aa)
	pard6b-2	Uncharacterized protein. (376 aa)
	F11r.S	Uncharacterized protein. (289 aa)
	cldn2	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (231 aa)
	cldn1	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (211 aa)
	Prkci.L	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (588 aa)
	patj	Uncharacterized protein. (1796 aa)
	Tjp1.S	Uncharacterized protein; Belongs to the MAGUK family. (1705 aa)
	mamdc2	Uncharacterized protein. (689 aa)
	tjp3	Uncharacterized protein; Belongs to the MAGUK family. (1025 aa)
	Mamdc2.L	Uncharacterized protein. (688 aa)
	Tjp2.L	Uncharacterized protein. (430 aa)
	fos	BZIP domain-containing protein. (369 aa)
	cldn1-2	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (211 aa)
	actl6a	Baf53a-pending-prov protein; Belongs to the actin family. (429 aa)
	tjp3-2	MGC52795 protein; Belongs to the MAGUK family. (1010 aa)
	mal	MGC68692 protein. (159 aa)
	fos-2	MGC80305 protein. (368 aa)
	cldn3	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (213 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F11r.S	Marveld3.L	A0A1L8F5C9	A0A310TN75	Uncharacterized protein.	MARVEL domain-containing protein.	0.671
F11r.S	Prkci.L	A0A1L8F5C9	A0A1L8GAK2	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.747
F11r.S	Tjp1.S	A0A1L8F5C9	A0A1L8H090	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.995
F11r.S	Tjp2.L	A0A1L8F5C9	A0A1L8HYU8	Uncharacterized protein.	Uncharacterized protein.	0.918
F11r.S	cldn1	A0A1L8F5C9	A0A1L8GA96	Uncharacterized protein.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.904
F11r.S	cldn1-2	A0A1L8F5C9	Q8AVG4	Uncharacterized protein.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.904
F11r.S	cldn2	A0A1L8F5C9	A0A1L8F6M6	Uncharacterized protein.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.523
F11r.S	cldn3	A0A1L8F5C9	Q6AX76	Uncharacterized protein.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.629
F11r.S	f11r	A0A1L8F5C9	Q2VPP6	Uncharacterized protein.	LOC398627 protein.	0.901
F11r.S	pard6b	A0A1L8F5C9	A0A1L8ELH2	Uncharacterized protein.	Uncharacterized protein.	0.542
F11r.S	pard6b-2	A0A1L8F5C9	A0A1L8ESP6	Uncharacterized protein.	Uncharacterized protein.	0.542
F11r.S	patj	A0A1L8F5C9	A0A1L8GLZ0	Uncharacterized protein.	Uncharacterized protein.	0.508
F11r.S	tjp3	A0A1L8F5C9	A0A1L8HW84	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.842
F11r.S	tjp3-2	A0A1L8F5C9	Q7ZTN1	Uncharacterized protein.	MGC52795 protein; Belongs to the MAGUK family.	0.842
Marveld3.L	F11r.S	A0A310TN75	A0A1L8F5C9	MARVEL domain-containing protein.	Uncharacterized protein.	0.671
Marveld3.L	Tjp1.S	A0A310TN75	A0A1L8H090	MARVEL domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.519
Marveld3.L	Tjp2.L	A0A310TN75	A0A1L8HYU8	MARVEL domain-containing protein.	Uncharacterized protein.	0.671
Marveld3.L	cldn1	A0A310TN75	A0A1L8GA96	MARVEL domain-containing protein.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.426
Marveld3.L	cldn1-2	A0A310TN75	Q8AVG4	MARVEL domain-containing protein.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.426
Marveld3.L	cldn2	A0A310TN75	A0A1L8F6M6	MARVEL domain-containing protein.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.424