24 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cbs.L	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (565 aa)
	Dhps.L	Uncharacterized protein. (356 aa)
	vamp8	V-SNARE coiled-coil homology domain-containing protein. (107 aa)
	calml4-2	Uncharacterized protein. (152 aa)
	calml4	Uncharacterized protein. (153 aa)
	sec61a1	Plug_translocon domain-containing protein. (476 aa)
	Cyb5b.L	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (141 aa)
	cyb5b	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (216 aa)
	A0A1L8GCY3	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (339 aa)
	calm1	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	cyb5a	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (132 aa)
	Hspa8.L	Uncharacterized protein; Belongs to the heat shock protein 70 family. (646 aa)
	sec61b	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (96 aa)
	hspa1l	Hsc70 protein; Belongs to the heat shock protein 70 family. (650 aa)
	sec61a1-2	Sec61a1 protein. (476 aa)
	ubl3	Ubiquitin-like protein. (117 aa)
	Rnf5.L	RING-type domain-containing protein. (197 aa)
	vamp7	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	cyb5a-2	MGC80327 protein; Belongs to the cytochrome b5 family. (132 aa)
	cbs	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (562 aa)
	vamp7-2	Sybl1-prov protein; Belongs to the synaptobrevin family. (220 aa)
	vamp8-2	LOC496218 protein. (105 aa)
	A0A1L8HX68	Ubiquitin-like domain-containing protein. (173 aa)
	Sgta.L	TPR_REGION domain-containing protein. (314 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8GCY3	A0A1L8HX68	A0A1L8GCY3	A0A1L8HX68	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Ubiquitin-like domain-containing protein.	0.493
A0A1L8GCY3	Cyb5b.L	A0A1L8GCY3	A0A1L8GKY3	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.474
A0A1L8GCY3	Sgta.L	A0A1L8GCY3	A0A1L8HWF0	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	TPR_REGION domain-containing protein.	0.801
A0A1L8GCY3	cyb5a	A0A1L8GCY3	A0A1L8FSJ5	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.473
A0A1L8GCY3	cyb5a-2	A0A1L8GCY3	Q6DE13	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	MGC80327 protein; Belongs to the cytochrome b5 family.	0.473
A0A1L8GCY3	cyb5b	A0A1L8GCY3	A0A1L8GF07	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.474
A0A1L8GCY3	sec61b	A0A1L8GCY3	Q8AVT7	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.841
A0A1L8GCY3	vamp7	A0A1L8GCY3	A0A1L8F360	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.737
A0A1L8GCY3	vamp7-2	A0A1L8GCY3	Q6DDH7	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Sybl1-prov protein; Belongs to the synaptobrevin family.	0.737
A0A1L8GCY3	vamp8	A0A1L8GCY3	A0A1L8H1L5	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	V-SNARE coiled-coil homology domain-containing protein.	0.956
A0A1L8GCY3	vamp8-2	A0A1L8GCY3	Q5M7F0	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	LOC496218 protein.	0.956
A0A1L8HX68	A0A1L8GCY3	A0A1L8HX68	A0A1L8GCY3	Ubiquitin-like domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.493
A0A1L8HX68	Cyb5b.L	A0A1L8HX68	A0A1L8GKY3	Ubiquitin-like domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.409
A0A1L8HX68	Dhps.L	A0A1L8HX68	A0A1L8H330	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.505
A0A1L8HX68	Hspa8.L	A0A1L8HX68	A0A1L8FKY3	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.637
A0A1L8HX68	Rnf5.L	A0A1L8HX68	A0A1L8F8C0	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.740
A0A1L8HX68	Sgta.L	A0A1L8HX68	A0A1L8HWF0	Ubiquitin-like domain-containing protein.	TPR_REGION domain-containing protein.	0.859
A0A1L8HX68	cyb5a	A0A1L8HX68	A0A1L8FSJ5	Ubiquitin-like domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.407
A0A1L8HX68	cyb5a-2	A0A1L8HX68	Q6DE13	Ubiquitin-like domain-containing protein.	MGC80327 protein; Belongs to the cytochrome b5 family.	0.407
A0A1L8HX68	cyb5b	A0A1L8HX68	A0A1L8GF07	Ubiquitin-like domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.409