29 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Gnat	Uncharacterized protein. (350 aa)
	Rho.L	Rhodopsin. (459 aa)
	Opsin	Rhodopsin. (403 aa)
	Arrb2.L	Arrestin_C domain-containing protein. (446 aa)
	gucy2d	Guanylate cyclase. (1078 aa)
	A0A1L8H8M4	G_PROTEIN_RECEP_F1_2 domain-containing protein. (393 aa)
	grk1	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (557 aa)
	cnga3	Cyclic nucleotide-binding domain-containing protein. (679 aa)
	A0A1L8HGU3	G_PROTEIN_RECEP_F1_2 domain-containing protein. (389 aa)
	grk1-2	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (557 aa)
	A0A1L8HMD5	Alpha-synuclein; Belongs to the synuclein family. (212 aa)
	cnga1	Cyclic nucleotide-binding domain-containing protein. (706 aa)
	A0A1L8HXX0	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (387 aa)
	LOC397896	G protein alpha subunit. (354 aa)
	rcvrn.2	MGC84117 protein. (192 aa)
	rcvrn.2-2	MGC84424 protein. (192 aa)
	gnat2	MGC84412 protein. (354 aa)
	snca	Alpha-synuclein; Belongs to the synuclein family. (141 aa)
	A0A1L8EN80	Uncharacterized protein. (202 aa)
	A0A1L8F800	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (392 aa)
	A0A1L8F3C7	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (391 aa)
	A0A1L8EUU9	Uncharacterized protein. (202 aa)
	A0A1L8FEF6	G_PROTEIN_RECEP_F1_2 domain-containing protein. (380 aa)
	A0A1L8FJ77	G_PROTEIN_RECEP_F1_2 domain-containing protein. (381 aa)
	grk7	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (550 aa)
	A0A1L8G4Y3	G_PROTEIN_RECEP_F1_2 domain-containing protein. (392 aa)
	A0A1L8GAX0	G_PROTEIN_RECEP_F1_2 domain-containing protein. (392 aa)
	grk7-2	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (551 aa)
	A0A1L8GHL0	Rhodopsin. (354 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EN80	A0A1L8GHL0	A0A1L8EN80	A0A1L8GHL0	Uncharacterized protein.	Rhodopsin.	0.956
A0A1L8EN80	Arrb2.L	A0A1L8EN80	A0A1L8H368	Uncharacterized protein.	Arrestin_C domain-containing protein.	0.844
A0A1L8EN80	Gnat	A0A1L8EN80	A0A1L8GP75	Uncharacterized protein.	Uncharacterized protein.	0.587
A0A1L8EN80	Opsin	A0A1L8EN80	A0A1L8GPM0	Uncharacterized protein.	Rhodopsin.	0.957
A0A1L8EN80	Rho.L	A0A1L8EN80	A0A1L8GPJ9	Uncharacterized protein.	Rhodopsin.	0.934
A0A1L8EN80	cnga1	A0A1L8EN80	A0A1L8HTY9	Uncharacterized protein.	Cyclic nucleotide-binding domain-containing protein.	0.565
A0A1L8EN80	cnga3	A0A1L8EN80	A0A1L8HGU0	Uncharacterized protein.	Cyclic nucleotide-binding domain-containing protein.	0.669
A0A1L8EN80	grk1	A0A1L8EN80	A0A1L8H8W4	Uncharacterized protein.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.990
A0A1L8EN80	grk1-2	A0A1L8EN80	A0A1L8HGX8	Uncharacterized protein.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.990
A0A1L8EN80	grk7	A0A1L8EN80	A0A1L8G4T3	Uncharacterized protein.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.991
A0A1L8EN80	grk7-2	A0A1L8EN80	A0A1L8GB62	Uncharacterized protein.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.991
A0A1L8EN80	gucy2d	A0A1L8EN80	A0A1L8H3E6	Uncharacterized protein.	Guanylate cyclase.	0.542
A0A1L8EUU9	A0A1L8GHL0	A0A1L8EUU9	A0A1L8GHL0	Uncharacterized protein.	Rhodopsin.	0.956
A0A1L8EUU9	Arrb2.L	A0A1L8EUU9	A0A1L8H368	Uncharacterized protein.	Arrestin_C domain-containing protein.	0.844
A0A1L8EUU9	Gnat	A0A1L8EUU9	A0A1L8GP75	Uncharacterized protein.	Uncharacterized protein.	0.587
A0A1L8EUU9	Opsin	A0A1L8EUU9	A0A1L8GPM0	Uncharacterized protein.	Rhodopsin.	0.957
A0A1L8EUU9	Rho.L	A0A1L8EUU9	A0A1L8GPJ9	Uncharacterized protein.	Rhodopsin.	0.933
A0A1L8EUU9	cnga1	A0A1L8EUU9	A0A1L8HTY9	Uncharacterized protein.	Cyclic nucleotide-binding domain-containing protein.	0.548
A0A1L8EUU9	cnga3	A0A1L8EUU9	A0A1L8HGU0	Uncharacterized protein.	Cyclic nucleotide-binding domain-containing protein.	0.645
A0A1L8EUU9	grk1	A0A1L8EUU9	A0A1L8H8W4	Uncharacterized protein.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.992