STRINGSTRING
ss18l1 ss18l1 ntn1 ntn1 tuba4b tuba4b cxcr4 cxcr4 ntn3 ntn3 rab5c rab5c ss18l1-2 ss18l1-2 ntn1-2 ntn1-2 Cxcr4.L Cxcr4.L ntn3-2 ntn3-2 arhgap5 arhgap5 Was.S Was.S nes nes Syt11.S Syt11.S Was.L Was.L Pou5f3.1 Pou5f3.1 pou5f3.2 pou5f3.2 arhgap5-2 arhgap5-2 nes-2 nes-2 A0A1L8FDJ8 A0A1L8FDJ8 ntn5 ntn5 dpysl4 dpysl4 Aldh4a1.L Aldh4a1.L pard3 pard3 pard3-2 pard3-2 stmn2 stmn2 actr2 actr2 A0A1L8G4B9 A0A1L8G4B9 odc1 odc1 Pfn4.S Pfn4.S actr2-2 actr2-2 cfl1 cfl1 A0A1L8GCZ4 A0A1L8GCZ4 bdnf bdnf Arhgap1.S Arhgap1.S Elavl4.L Elavl4.L brk1 brk1 Arhgap1.L Arhgap1.L Cfl1.L Cfl1.L Atp6v0d1.L Atp6v0d1.L Rho.L Rho.L wasl wasl Hsp90b1.L Hsp90b1.L Wasl.L Wasl.L reln reln pkn1 pkn1 tubb4a tubb4a ngf ngf Arg2.S Arg2.S Stmn1.S Stmn1.S wasf2 wasf2 hnrnpr hnrnpr wasf3 wasf3 Ngf.L Ngf.L wasf2-2 wasf2-2 stmn1 stmn1 Arg2.L Arg2.L wasf3-2 wasf3-2 Slit2.S Slit2.S gpm6a gpm6a rab33b rab33b rnf10 rnf10 Clip1.S Clip1.S A0A1L8HTQ2 A0A1L8HTQ2 Rab33b.L Rab33b.L Sugp1.L Sugp1.L rab35l rab35l rnf10-2 rnf10-2 clip1 clip1 Homer1.L Homer1.L ntn5-2 ntn5-2 tmsb4x tmsb4x iqgap1 iqgap1 rhob rhob pfn1 pfn1 stmn3 stmn3 rac1 rac1 rab11b.2 rab11b.2 rab3a rab3a vamp1 vamp1 bdnf-2 bdnf-2 snap25 snap25 rab27a rab27a arpc4 arpc4 napb napb rab7a rab7a tuba4b-2 tuba4b-2 rab27b rab27b stmn2-2 stmn2-2 rab27a-2 rab27a-2 rab7a-2 rab7a-2 pc.1 pc.1 rhoa rhoa got1 got1 pfn2 pfn2 rhoc rhoc odc1-2 odc1-2 actl6a actl6a actr3-a actr3-a stmn3-2 stmn3-2 creb1 creb1 snap25-2 snap25-2 gpm6a-2 gpm6a-2 rac3 rac3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ss18l1Uncharacterized protein. (403 aa)
ntn1Uncharacterized protein. (602 aa)
tuba4bTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (434 aa)
cxcr4G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (358 aa)
ntn3Uncharacterized protein. (588 aa)
rab5cUncharacterized protein. (215 aa)
ss18l1-2Uncharacterized protein. (402 aa)
ntn1-2Uncharacterized protein. (602 aa)
Cxcr4.LG_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (450 aa)
ntn3-2Uncharacterized protein. (588 aa)
arhgap5Uncharacterized protein. (1498 aa)
Was.SUncharacterized protein. (472 aa)
nesIF rod domain-containing protein; Belongs to the intermediate filament family. (1875 aa)
Syt11.SUncharacterized protein. (373 aa)
Was.LUncharacterized protein. (471 aa)
Pou5f3.1POU domain protein. (445 aa)
pou5f3.2POU domain protein. (449 aa)
arhgap5-2Uncharacterized protein. (1495 aa)
nes-2IF rod domain-containing protein; Belongs to the intermediate filament family. (1954 aa)
A0A1L8FDJ8Uncharacterized protein. (412 aa)
ntn5Uncharacterized protein. (601 aa)
dpysl4Amidohydro-rel domain-containing protein. (573 aa)
Aldh4a1.LDelta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (555 aa)
pard3Uncharacterized protein. (1369 aa)
pard3-2Uncharacterized protein. (1332 aa)
stmn2Stathmin; Belongs to the stathmin family. (178 aa)
actr2Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (394 aa)
A0A1L8G4B9Profilin; Belongs to the profilin family. (126 aa)
odc1Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (460 aa)
Pfn4.SProfilin; Belongs to the profilin family. (172 aa)
actr2-2Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (394 aa)
cfl1ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (168 aa)
A0A1L8GCZ4Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1177 aa)
bdnfBrain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (247 aa)
Arhgap1.SUncharacterized protein. (473 aa)
Elavl4.LELAV-like protein; Belongs to the RRM elav family. (400 aa)
brk1Uncharacterized protein. (75 aa)
Arhgap1.LUncharacterized protein. (435 aa)
Cfl1.LADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (292 aa)
Atp6v0d1.LV-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family. (358 aa)
Rho.LRhodopsin. (459 aa)
waslUncharacterized protein. (509 aa)
Hsp90b1.LHATPase_c domain-containing protein. (843 aa)
Wasl.LUncharacterized protein. (509 aa)
relnUncharacterized protein. (3461 aa)
pkn1Uncharacterized protein. (942 aa)
tubb4aTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
ngfNGF domain-containing protein; Belongs to the NGF-beta family. (242 aa)
Arg2.SArginase. (360 aa)
Stmn1.SUncharacterized protein. (242 aa)
wasf2WH2 domain-containing protein. (477 aa)
hnrnprUncharacterized protein. (532 aa)
wasf3WH2 domain-containing protein. (500 aa)
Ngf.LNGF domain-containing protein; Belongs to the NGF-beta family. (232 aa)
wasf2-2WH2 domain-containing protein. (482 aa)
stmn1Stathmin; Belongs to the stathmin family. (145 aa)
Arg2.LArginase. (360 aa)
wasf3-2WH2 domain-containing protein. (496 aa)
Slit2.SUncharacterized protein. (1530 aa)
gpm6aUncharacterized protein. (278 aa)
rab33bUncharacterized protein. (226 aa)
rnf10RING-type domain-containing protein. (756 aa)
Clip1.SUncharacterized protein. (2319 aa)
A0A1L8HTQ2Uncharacterized protein. (1521 aa)
Rab33b.LUncharacterized protein. (226 aa)
Sugp1.LUncharacterized protein. (620 aa)
rab35lUncharacterized protein. (201 aa)
rnf10-2RING-type domain-containing protein. (757 aa)
clip1Uncharacterized protein. (2362 aa)
Homer1.LWH1 domain-containing protein. (390 aa)
ntn5-2LOC100127305 protein. (601 aa)
tmsb4xThymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family. (44 aa)
iqgap1XIQGAP1 protein. (1657 aa)
rhobMGC131029 protein. (196 aa)
pfn1Profilin; Belongs to the profilin family. (138 aa)
stmn3Stathmin; Belongs to the stathmin family. (180 aa)
rac1MGC114731 protein. (192 aa)
rab11b.2LOC496163 protein. (218 aa)
rab3aRab3a-prov protein. (220 aa)
vamp1LOC495063 protein. (101 aa)
bdnf-2Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (247 aa)
snap25Synaptosomal-associated protein; Belongs to the SNAP-25 family. (206 aa)
rab27aLOC494641 protein. (221 aa)
arpc4Actin-related protein 2/3 complex subunit 4; Actin-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (Probable). The Arp2/3 complex promotes homologous recombination (HR) [...] (168 aa)
napbNapb protein. (295 aa)
rab7aRab7-prov protein. (207 aa)
tuba4b-2Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
rab27bMGC80016 protein. (218 aa)
stmn2-2Stathmin; Belongs to the stathmin family. (178 aa)
rab27a-2MGC80943 protein. (221 aa)
rab7a-2MGC68523 protein. (207 aa)
pc.1Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1177 aa)
rhoaMGC64296 protein. (193 aa)
got1Aspartate aminotransferase. (411 aa)
pfn2Profilin; Belongs to the profilin family. (140 aa)
rhocMGC52893 protein. (193 aa)
odc1-2Odc1-prov protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (460 aa)
actl6aBaf53a-pending-prov protein; Belongs to the actin family. (429 aa)
actr3-aActin-related protein 3-A; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament (By similarity). In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (Probable [...] (418 aa)
stmn3-2Stathmin; Belongs to the stathmin family. (180 aa)
creb1Creb1-prov protein. (324 aa)
snap25-2Synaptosomal-associated protein; Belongs to the SNAP-25 family. (206 aa)
gpm6a-2Myelin PLP-related membrane protein DM beta. (278 aa)
rac3RAC1 protein. (192 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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