STRINGSTRING
sp3 sp3 A0A1L8EZV1 A0A1L8EZV1 A0A1L8GHL0 A0A1L8GHL0 rom1 rom1 Rho.L Rho.L Opsin Opsin sp3-2 sp3-2 MGC84108 MGC84108 prph2 prph2 actl6a actl6a prph-2 prph-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sp3Uncharacterized protein. (717 aa)
A0A1L8EZV1Uncharacterized protein. (364 aa)
A0A1L8GHL0Rhodopsin. (354 aa)
rom1Uncharacterized protein. (345 aa)
Rho.LRhodopsin. (459 aa)
OpsinRhodopsin. (403 aa)
sp3-2LOC100037013 protein. (724 aa)
MGC84108MGC84108 protein. (364 aa)
prph2MGC64379 protein. (350 aa)
actl6aBaf53a-pending-prov protein; Belongs to the actin family. (429 aa)
prph-2Peripherin-2. (346 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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