12 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8GHL0	Rhodopsin. (354 aa)
	Rho.L	Rhodopsin. (459 aa)
	rpe65-2	Rpe65 protein. (533 aa)
	rgr	MGC84794 protein; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (295 aa)
	opn5	Opsin; Belongs to the G-protein coupled receptor 1 family. (341 aa)
	grk1-2	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (557 aa)
	grk1	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (557 aa)
	Arrb2.L	Arrestin_C domain-containing protein. (446 aa)
	Opsin	Rhodopsin. (403 aa)
	grk7	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (550 aa)
	grk7-2	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (551 aa)
	rpe65	Uncharacterized protein. (533 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8GHL0	Arrb2.L	A0A1L8GHL0	A0A1L8H368	Rhodopsin.	Arrestin_C domain-containing protein.	0.991
A0A1L8GHL0	Opsin	A0A1L8GHL0	A0A1L8GPM0	Rhodopsin.	Rhodopsin.	0.900
A0A1L8GHL0	Rho.L	A0A1L8GHL0	A0A1L8GPJ9	Rhodopsin.	Rhodopsin.	0.901
A0A1L8GHL0	grk1	A0A1L8GHL0	A0A1L8H8W4	Rhodopsin.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.994
A0A1L8GHL0	grk1-2	A0A1L8GHL0	A0A1L8HGX8	Rhodopsin.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.994
A0A1L8GHL0	grk7	A0A1L8GHL0	A0A1L8G4T3	Rhodopsin.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.995
A0A1L8GHL0	grk7-2	A0A1L8GHL0	A0A1L8GB62	Rhodopsin.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.995
A0A1L8GHL0	opn5	A0A1L8GHL0	E0R7P4	Rhodopsin.	Opsin; Belongs to the G-protein coupled receptor 1 family.	0.460
A0A1L8GHL0	rgr	A0A1L8GHL0	Q6DKA0	Rhodopsin.	MGC84794 protein; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.	0.657
A0A1L8GHL0	rpe65	A0A1L8GHL0	A0A1L8GLX0	Rhodopsin.	Uncharacterized protein.	0.818
A0A1L8GHL0	rpe65-2	A0A1L8GHL0	Q7ZYK2	Rhodopsin.	Rpe65 protein.	0.821
Arrb2.L	A0A1L8GHL0	A0A1L8H368	A0A1L8GHL0	Arrestin_C domain-containing protein.	Rhodopsin.	0.991
Arrb2.L	Opsin	A0A1L8H368	A0A1L8GPM0	Arrestin_C domain-containing protein.	Rhodopsin.	0.996
Arrb2.L	Rho.L	A0A1L8H368	A0A1L8GPJ9	Arrestin_C domain-containing protein.	Rhodopsin.	0.994
Arrb2.L	grk1	A0A1L8H368	A0A1L8H8W4	Arrestin_C domain-containing protein.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.983
Arrb2.L	grk1-2	A0A1L8H368	A0A1L8HGX8	Arrestin_C domain-containing protein.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.983
Arrb2.L	grk7	A0A1L8H368	A0A1L8G4T3	Arrestin_C domain-containing protein.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.982
Arrb2.L	grk7-2	A0A1L8H368	A0A1L8GB62	Arrestin_C domain-containing protein.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.982
Arrb2.L	opn5	A0A1L8H368	E0R7P4	Arrestin_C domain-containing protein.	Opsin; Belongs to the G-protein coupled receptor 1 family.	0.739
Arrb2.L	rgr	A0A1L8H368	Q6DKA0	Arrestin_C domain-containing protein.	MGC84794 protein; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.	0.434