(8 nodes) (1994) An NLS is sufficient to engage facilitated translocation by the nuclear pore complex and subsequent intranuclear binding. network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	glb1	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family. (642 aa)
	Glb1l2.S	Beta-galactosidase. (616 aa)
	glb1l2	Beta-galactosidase. (634 aa)
	Glb1l.L	Beta-galactosidase. (645 aa)
	nck2	Cytoplasmic protein. (381 aa)
	nck2-2	Cytoplasmic protein. (381 aa)
	nck1	Cytoplasmic protein. (377 aa)
	nck1-2	Cytoplasmic protein. (377 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Glb1l.L	glb1	A0A1L8FWQ8	A0A1L8EVM8	Beta-galactosidase.	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.	0.902
glb1	Glb1l.L	A0A1L8EVM8	A0A1L8FWQ8	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.	Beta-galactosidase.	0.902
nck1	nck2	P79956	A0A1L8H8L9	Cytoplasmic protein.	Cytoplasmic protein.	0.657
nck1	nck2-2	P79956	A0A1L8HGP4	Cytoplasmic protein.	Cytoplasmic protein.	0.657
nck1-2	nck2	Q32NQ4	A0A1L8H8L9	Cytoplasmic protein.	Cytoplasmic protein.	0.657
nck1-2	nck2-2	Q32NQ4	A0A1L8HGP4	Cytoplasmic protein.	Cytoplasmic protein.	0.657
nck2	nck1	A0A1L8H8L9	P79956	Cytoplasmic protein.	Cytoplasmic protein.	0.657
nck2	nck1-2	A0A1L8H8L9	Q32NQ4	Cytoplasmic protein.	Cytoplasmic protein.	0.657
nck2-2	nck1	A0A1L8HGP4	P79956	Cytoplasmic protein.	Cytoplasmic protein.	0.657
nck2-2	nck1-2	A0A1L8HGP4	Q32NQ4	Cytoplasmic protein.	Cytoplasmic protein.	0.657