99 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tnfaip6	Uncharacterized protein. (266 aa)
	nrp2	Neuropilin; Belongs to the neuropilin family. (933 aa)
	Kremen2.S	Uncharacterized protein. (421 aa)
	nrp2-2	Neuropilin; Belongs to the neuropilin family. (934 aa)
	LOC100489456.L	Metalloendopeptidase. (438 aa)
	kremen2	Uncharacterized protein. (420 aa)
	A0A1L8F5Y4	Peptidase M12B domain-containing protein. (1583 aa)
	A0A1L8FBB5	Metalloendopeptidase. (541 aa)
	astl3c	Metalloendopeptidase. (567 aa)
	A0A1L8FDT4	Uncharacterized protein. (1583 aa)
	Cuzd1.2.S	Uncharacterized protein. (621 aa)
	masp2	Uncharacterized protein; Belongs to the peptidase S1 family. (689 aa)
	St14.S	Uncharacterized protein. (889 aa)
	megf8	Uncharacterized protein. (2730 aa)
	A0A1L8FHI5	CUB domain-containing protein. (390 aa)
	A0A1L8FI67	Uncharacterized protein. (1036 aa)
	A0A1L8FIF2	Uncharacterized protein; Belongs to the peptidase S1 family. (708 aa)
	C1r.L	Uncharacterized protein; Belongs to the peptidase S1 family. (496 aa)
	C1s.L	Uncharacterized protein; Belongs to the peptidase S1 family. (687 aa)
	A0A1L8FIZ7	Uncharacterized protein. (1329 aa)
	Cuzd1.L	Uncharacterized protein. (617 aa)
	Tll2.L	Metalloendopeptidase. (1019 aa)
	masp2-2	CUB domain-containing protein. (183 aa)
	A0A1L8FL12	Uncharacterized protein. (811 aa)
	mfrp	Uncharacterized protein. (590 aa)
	megf8-2	Uncharacterized protein. (2730 aa)
	A0A1L8FP74	CUB domain-containing protein. (421 aa)
	A0A1L8FQN3	Neuropilin; Belongs to the neuropilin family. (883 aa)
	neto1	Uncharacterized protein. (526 aa)
	A0A1L8FTP9	Uncharacterized protein. (3121 aa)
	A0A1L8FTR0	Uncharacterized protein. (1022 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (926 aa)
	A0A1L8FVN0	Uncharacterized protein. (3628 aa)
	Neto1.L	Uncharacterized protein. (512 aa)
	lrp12	Uncharacterized protein. (843 aa)
	A0A1L8FZV1	Uncharacterized protein. (3530 aa)
	A0A1L8G206	CUB domain-containing protein. (330 aa)
	Dmbt1.S	Uncharacterized protein. (646 aa)
	Dcbld1.S	Uncharacterized protein. (742 aa)
	A0A1L8G3G9	Uncharacterized protein. (3231 aa)
	Pcolce2.S	Uncharacterized protein. (412 aa)
	A0A1L8G729	Uncharacterized protein. (1442 aa)
	A0A1L8G7Q9	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (1992 aa)
	A0A1L8G857	Uncharacterized protein. (848 aa)
	Dcbld1.L	Uncharacterized protein. (680 aa)
	A0A1L8GA31	Uncharacterized protein. (3306 aa)
	pcolce2	Uncharacterized protein. (415 aa)
	Ovch2.S	Uncharacterized protein; Belongs to the peptidase S1 family. (1004 aa)
	A0A1L8GDF0	Metalloendopeptidase. (538 aa)
	A0A1L8GDQ6	Uncharacterized protein; Belongs to the peptidase S1 family. (725 aa)
	syt13	Metalloendopeptidase. (500 aa)
	A0A1L8GDZ1	Metalloendopeptidase. (469 aa)
	scube2	Uncharacterized protein. (1003 aa)
	neto2	Uncharacterized protein. (525 aa)
	A0A1L8GFY9	Uncharacterized protein. (534 aa)
	scube2-2	Uncharacterized protein. (946 aa)
	LOC100496293.L	Metalloendopeptidase. (554 aa)
	astl2d.3	Metalloendopeptidase. (497 aa)
	astl2g	Metalloendopeptidase. (502 aa)
	A0A1L8GIU1	Uncharacterized protein. (437 aa)
	Astl.L	Metalloendopeptidase. (502 aa)
	A0A1L8GIV5	Metalloendopeptidase. (595 aa)
	A0A1L8GIZ1	Metalloendopeptidase. (433 aa)
	neto2-2	Uncharacterized protein. (525 aa)
	lrp3	Uncharacterized protein. (823 aa)
	cdcp2	Uncharacterized protein. (536 aa)
	A0A1L8GQK0	Uncharacterized protein. (1478 aa)
	A0A1L8GW56	Uncharacterized protein. (978 aa)
	Ovch1.L	Uncharacterized protein; Belongs to the peptidase S1 family. (1538 aa)
	bmp1	Metalloendopeptidase. (976 aa)
	Pcolce.L	Uncharacterized protein. (409 aa)
	A0A1L8H4S6	Uncharacterized protein. (662 aa)
	A0A1L8H544	Uncharacterized protein; Belongs to the peptidase S1 family. (1034 aa)
	dcbld2	Uncharacterized protein. (703 aa)
	A0A1L8H7V7	Uncharacterized protein. (133 aa)
	A0A1L8H821	Uncharacterized protein. (3250 aa)
	pdgfd	Uncharacterized protein. (389 aa)
	dcbld2-2	Uncharacterized protein. (702 aa)
	A0A1L8HD83	Uncharacterized protein. (662 aa)
	A0A1L8HFL1	Uncharacterized protein. (133 aa)
	A0A1L8HFM0	Uncharacterized protein. (3220 aa)
	atrn	Uncharacterized protein. (1350 aa)
	Tll1.S	Metalloendopeptidase. (1007 aa)
	pdgfc	Uncharacterized protein; Belongs to the PDGF/VEGF growth factor family. (347 aa)
	lrp10	CUB domain-containing protein. (630 aa)
	sez6l	Uncharacterized protein. (1002 aa)
	A0A1L8HQG8	CUB domain-containing protein. (716 aa)
	Kremen1.S	Kremen protein; Receptor for Dickkopf proteins. Cooperates with DKK1/2 to inhibit Wnt/beta-catenin signaling by promoting the endocytosis of Wnt receptors LRP5 and LRP6. (452 aa)
	pdgfc-2	Uncharacterized protein; Belongs to the PDGF/VEGF growth factor family. (347 aa)
	A0A1L8HVB6	Uncharacterized protein; Belongs to the peptidase S1 family. (1000 aa)
	lrp10-2	CUB domain-containing protein. (625 aa)
	Sez6l.L	Uncharacterized protein. (1002 aa)
	A0A1L8I0P3	CUB domain-containing protein. (749 aa)
	kremen1	Kremen protein; Receptor for Dickkopf proteins. Cooperates with DKK1/2 to inhibit Wnt/beta-catenin signaling by promoting the endocytosis of Wnt receptors LRP5 and LRP6. (450 aa)
	MASP3b	Mannose-binding lectin-associated serine protease-3b; Belongs to the peptidase S1 family. (717 aa)
	3a	Mannose-binding lectin-associated serine protease-3a; Belongs to the peptidase S1 family. (717 aa)
	Bmp1	Metalloendopeptidase. (977 aa)
	tnfaip6-2	LOC496285 protein. (266 aa)
	astl2e.2	Metalloendopeptidase. (499 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
3a	C1r.L	B7ZRP7	A0A1L8FIF5	Mannose-binding lectin-associated serine protease-3a; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.468
3a	C1s.L	B7ZRP7	A0A1L8FIG6	Mannose-binding lectin-associated serine protease-3a; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.619
3a	masp2	B7ZRP7	A0A1L8FF99	Mannose-binding lectin-associated serine protease-3a; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.847
3a	masp2-2	B7ZRP7	A0A1L8FKW9	Mannose-binding lectin-associated serine protease-3a; Belongs to the peptidase S1 family.	CUB domain-containing protein.	0.830
A0A1L8FIF2	C1s.L	A0A1L8FIF2	A0A1L8FIG6	Uncharacterized protein; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.997
Bmp1	C1r.L	B7ZS79	A0A1L8FIF5	Metalloendopeptidase.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.556
Bmp1	C1s.L	B7ZS79	A0A1L8FIG6	Metalloendopeptidase.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.476
Bmp1	Pcolce2.S	B7ZS79	A0A1L8G4A4	Metalloendopeptidase.	Uncharacterized protein.	0.582
Bmp1	pcolce2	B7ZS79	A0A1L8GB12	Metalloendopeptidase.	Uncharacterized protein.	0.582
C1r.L	3a	A0A1L8FIF5	B7ZRP7	Uncharacterized protein; Belongs to the peptidase S1 family.	Mannose-binding lectin-associated serine protease-3a; Belongs to the peptidase S1 family.	0.468
C1r.L	Bmp1	A0A1L8FIF5	B7ZS79	Uncharacterized protein; Belongs to the peptidase S1 family.	Metalloendopeptidase.	0.556
C1r.L	C1s.L	A0A1L8FIF5	A0A1L8FIG6	Uncharacterized protein; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.999
C1r.L	MASP3b	A0A1L8FIF5	B7ZRM5	Uncharacterized protein; Belongs to the peptidase S1 family.	Mannose-binding lectin-associated serine protease-3b; Belongs to the peptidase S1 family.	0.406
C1r.L	bmp1	A0A1L8FIF5	A0A1L8H230	Uncharacterized protein; Belongs to the peptidase S1 family.	Metalloendopeptidase.	0.556
C1r.L	masp2	A0A1L8FIF5	A0A1L8FF99	Uncharacterized protein; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.454
C1r.L	masp2-2	A0A1L8FIF5	A0A1L8FKW9	Uncharacterized protein; Belongs to the peptidase S1 family.	CUB domain-containing protein.	0.403
C1s.L	3a	A0A1L8FIG6	B7ZRP7	Uncharacterized protein; Belongs to the peptidase S1 family.	Mannose-binding lectin-associated serine protease-3a; Belongs to the peptidase S1 family.	0.619
C1s.L	A0A1L8FIF2	A0A1L8FIG6	A0A1L8FIF2	Uncharacterized protein; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.997
C1s.L	Bmp1	A0A1L8FIG6	B7ZS79	Uncharacterized protein; Belongs to the peptidase S1 family.	Metalloendopeptidase.	0.476
C1s.L	C1r.L	A0A1L8FIG6	A0A1L8FIF5	Uncharacterized protein; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.999