56 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	herpud2	Ubiquitin-like domain-containing protein. (398 aa)
	tmub1	Ubiquitin-like domain-containing protein. (308 aa)
	Zfand4.L	Uncharacterized protein. (701 aa)
	ubtd1	Ubiquitin-like domain-containing protein. (231 aa)
	Zfand4.S	Uncharacterized protein. (690 aa)
	sacs	Uncharacterized protein. (4566 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	Ubl7.L	Uncharacterized protein. (409 aa)
	ubtd2-2	Ubiquitin-like domain-containing protein. (234 aa)
	ubtd2	Ubiquitin-like domain-containing protein. (234 aa)
	ubl7	Uncharacterized protein. (373 aa)
	ublcp1	Uncharacterized protein. (318 aa)
	Herpud1.S	Ubiquitin-like domain-containing protein. (364 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	tmub2	Ubiquitin-like domain-containing protein. (324 aa)
	sumo2	Small ubiquitin-related modifier. (95 aa)
	Sumo1.S	Ubiquitin-like domain-containing protein. (141 aa)
	A0A1L8EQP0	Ubiquitin-like domain-containing protein. (329 aa)
	A0A1L8ERB7	Ubiquitin-like domain-containing protein. (144 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (490 aa)
	tmub2-2	Ubiquitin-like domain-containing protein. (323 aa)
	sumo2-2	Ubiquitin-like domain-containing protein. (98 aa)
	Sumo1.L	Ubiquitin-like domain-containing protein. (148 aa)
	A0A1L8EYB4	Ubiquitin-like domain-containing protein. (284 aa)
	Elob.L	Ubiquitin-like domain-containing protein. (200 aa)
	A0A1L8F1M8	Ubiquitin-like domain-containing protein. (148 aa)
	Bag6.S	Ubiquitin-like domain-containing protein. (1116 aa)
	ubqln4	Uncharacterized protein. (600 aa)
	bag6	Ubiquitin-like domain-containing protein. (1137 aa)
	Ubqln4.L	Uncharacterized protein. (599 aa)
	A0A1L8FF02	Ubiquitin-like domain-containing protein. (232 aa)
	bag1	Uncharacterized protein. (208 aa)
	A0A1L8FTA7	Ubiquitin-like domain-containing protein. (105 aa)
	herpud1	MGC64386 protein. (363 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	uba52	MGC80109 protein. (128 aa)
	sf3a1	MGC80562 protein. (802 aa)
	rps27a	MGC81889 protein. (156 aa)
	usp14-2	Ubiquitin carboxyl-terminal hydrolase. (489 aa)
	fau-2	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	uhrf2-2	Uhrf2 protein. (845 aa)
	A0A310U5D8	Rad60-SLD domain-containing protein. (67 aa)
	A0A310U421	Ubiquitin-like domain-containing protein. (93 aa)
	A0A1L8HYN4	Ubiquitin-like domain-containing protein. (122 aa)
	Ubqln1.L	Uncharacterized protein. (564 aa)
	Rad23b.L	Uncharacterized protein. (419 aa)
	A0A1L8HX68	Ubiquitin-like domain-containing protein. (173 aa)
	midn-2	Ubiquitin-like domain-containing protein. (453 aa)
	ubc	Uncharacterized protein. (533 aa)
	A0A1L8HPJ8	Ubiquitin-like domain-containing protein. (125 aa)
	ubqln1	Uncharacterized protein. (560 aa)
	uhrf2	Uncharacterized protein. (845 aa)
	Rad23b.S	Uncharacterized protein. (412 aa)
	midn	Ubiquitin-like domain-containing protein. (451 aa)
	Uhrf1.S	Uncharacterized protein. (397 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EQP0	A0A1L8F1M8	A0A1L8EQP0	A0A1L8F1M8	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.647
A0A1L8EQP0	A0A1L8FTA7	A0A1L8EQP0	A0A1L8FTA7	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.738
A0A1L8EQP0	A0A1L8G5V1	A0A1L8EQP0	A0A1L8G5V1	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.816
A0A1L8EQP0	A0A1L8HCZ9	A0A1L8EQP0	A0A1L8HCZ9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.647
A0A1L8EQP0	A0A1L8HPJ8	A0A1L8EQP0	A0A1L8HPJ8	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.591
A0A1L8EQP0	A0A1L8HX68	A0A1L8EQP0	A0A1L8HX68	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.738
A0A1L8EQP0	A0A1L8HYN4	A0A1L8EQP0	A0A1L8HYN4	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.591
A0A1L8EQP0	A0A310U421	A0A1L8EQP0	A0A310U421	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.647
A0A1L8EQP0	Rad23b.L	A0A1L8EQP0	A0A1L8HXY0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.656
A0A1L8EQP0	Rad23b.S	A0A1L8EQP0	A0A1L8HNW9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.656
A0A1L8EQP0	Ubl7.L	A0A1L8EQP0	A0A1L8H065	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.541
A0A1L8EQP0	Ubqln1.L	A0A1L8EQP0	A0A1L8HYC0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.548
A0A1L8EQP0	Ubqln4.L	A0A1L8EQP0	A0A1L8FCE3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.570
A0A1L8EQP0	Zfand4.L	A0A1L8EQP0	A0A1L8FJR0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.696
A0A1L8EQP0	Zfand4.S	A0A1L8EQP0	A0A1L8FF23	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.696
A0A1L8EQP0	fau	A0A1L8EQP0	A0A1L8GCW7	Ubiquitin-like domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.647
A0A1L8EQP0	fau-2	A0A1L8EQP0	Q4KLF0	Ubiquitin-like domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.647
A0A1L8EQP0	rps27a	A0A1L8EQP0	Q6GMC1	Ubiquitin-like domain-containing protein.	MGC81889 protein.	0.816
A0A1L8EQP0	uba52	A0A1L8EQP0	Q6GQF3	Ubiquitin-like domain-containing protein.	MGC80109 protein.	0.738
A0A1L8EQP0	ubc	A0A1L8EQP0	A0A1L8HQK4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.647