69 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8HYI9	Uncharacterized protein; Belongs to the semaphorin family. (855 aa)
	A0A310U4D3	Uncharacterized protein. (974 aa)
	sema6d	Semaphorin 6D4; Belongs to the semaphorin family. (1085 aa)
	sema5b	MGC68835 protein. (1088 aa)
	A0A1L8EKN3	PSI domain-containing protein. (501 aa)
	pttg1ip.1	Uncharacterized protein. (166 aa)
	A0A1L8ERY5	PSI domain-containing protein. (514 aa)
	A0A1L8EVC1	Sema domain-containing protein. (1089 aa)
	Pttg1ip.1.L	Uncharacterized protein. (172 aa)
	plxna3	Sema domain-containing protein. (1869 aa)
	sema3fl	Uncharacterized protein; Belongs to the semaphorin family. (695 aa)
	plxnb3	Sema domain-containing protein. (1866 aa)
	sema6c	Sema domain-containing protein; Belongs to the semaphorin family. (1042 aa)
	sema4a	Sema domain-containing protein; Belongs to the semaphorin family. (742 aa)
	plxna3-2	Sema domain-containing protein. (1869 aa)
	sema6c-2	Sema domain-containing protein; Belongs to the semaphorin family. (995 aa)
	Sema4a.L	Sema domain-containing protein; Belongs to the semaphorin family. (719 aa)
	A0A1L8FDT4	Uncharacterized protein. (1583 aa)
	Sema4g.S	Uncharacterized protein; Belongs to the semaphorin family. (797 aa)
	megf8	Uncharacterized protein. (2730 aa)
	A0A1L8FI67	Uncharacterized protein. (1036 aa)
	sema4g	Uncharacterized protein; Belongs to the semaphorin family. (831 aa)
	megf8-2	Uncharacterized protein. (2730 aa)
	Plxdc2.L	PSI domain-containing protein. (513 aa)
	A0A1L8FR13	Uncharacterized protein. (225 aa)
	A0A1L8FVK5	PSI domain-containing protein. (513 aa)
	Pttg1ip.2.L	PSI domain-containing protein. (264 aa)
	A0A1L8GHC7	Uncharacterized protein. (1368 aa)
	sema3b	Uncharacterized protein; Belongs to the semaphorin family. (773 aa)
	sema3f	Uncharacterized protein; Belongs to the semaphorin family. (780 aa)
	A0A1L8GHM9	Sema domain-containing protein. (1886 aa)
	plxnd1	Sema domain-containing protein. (1875 aa)
	plxnb1	Sema domain-containing protein. (2224 aa)
	sema3f-2	Uncharacterized protein; Belongs to the semaphorin family. (780 aa)
	A0A1L8GP86	Uncharacterized protein. (1303 aa)
	sema3b-2	Uncharacterized protein; Belongs to the semaphorin family. (773 aa)
	plxnd1-2	Sema domain-containing protein. (1875 aa)
	plxna1	Sema domain-containing protein. (1886 aa)
	A0A1L8GPZ4	Sema domain-containing protein. (2223 aa)
	sema4c	Uncharacterized protein; Belongs to the semaphorin family. (833 aa)
	Sema4b.S	Sema domain-containing protein; Belongs to the semaphorin family. (835 aa)
	Sema6d.S	Sema domain-containing protein; Belongs to the semaphorin family. (1047 aa)
	A0A1L8GTN6	Sema domain-containing protein. (78 aa)
	A0A1L8GTQ8	Uncharacterized protein. (1368 aa)
	sema3a	Uncharacterized protein; Belongs to the semaphorin family. (771 aa)
	Sema3c.S	Uncharacterized protein; Belongs to the semaphorin family. (748 aa)
	sema3d	Uncharacterized protein; Belongs to the semaphorin family. (766 aa)
	sema3e	Sema domain-containing protein; Belongs to the semaphorin family. (769 aa)
	plxnb2	Sema domain-containing protein. (1824 aa)
	Met.S	Uncharacterized protein. (1354 aa)
	plxnc1	Uncharacterized protein. (1520 aa)
	Met.L	Uncharacterized protein. (1355 aa)
	plxnb2-2	Sema domain-containing protein. (1826 aa)
	sema3c	Uncharacterized protein; Belongs to the semaphorin family. (748 aa)
	sema3d-2	Uncharacterized protein; Belongs to the semaphorin family. (776 aa)
	sema3a-2	Uncharacterized protein; Belongs to the semaphorin family. (774 aa)
	A0A1L8GZI2	Sema domain-containing protein. (1890 aa)
	A0A1L8GZY9	Sema domain-containing protein; Belongs to the semaphorin family. (574 aa)
	sema4b	Uncharacterized protein; Belongs to the semaphorin family. (835 aa)
	sema4c-2	Uncharacterized protein; Belongs to the semaphorin family. (834 aa)
	A0A1L8H680	Sema domain-containing protein. (1911 aa)
	A0A1L8HE13	Sema domain-containing protein. (1898 aa)
	atrn	Uncharacterized protein. (1350 aa)
	A0A1L8HMZ5	Sema domain-containing protein; Belongs to the semaphorin family. (917 aa)
	A0A1L8HPH6	Uncharacterized protein; Belongs to the semaphorin family. (853 aa)
	sema6a	Sema domain-containing protein; Belongs to the semaphorin family. (1018 aa)
	A0A1L8HSJ5	Uncharacterized protein. (970 aa)
	A0A1L8HW98	Sema domain-containing protein; Belongs to the semaphorin family. (917 aa)
	sema6a-2	Sema domain-containing protein; Belongs to the semaphorin family. (1018 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EVC1	A0A1L8GHC7	A0A1L8EVC1	A0A1L8GHC7	Sema domain-containing protein.	Uncharacterized protein.	0.643
A0A1L8EVC1	A0A1L8GHM9	A0A1L8EVC1	A0A1L8GHM9	Sema domain-containing protein.	Sema domain-containing protein.	0.436
A0A1L8EVC1	A0A1L8GP86	A0A1L8EVC1	A0A1L8GP86	Sema domain-containing protein.	Uncharacterized protein.	0.643
A0A1L8EVC1	A0A1L8GPZ4	A0A1L8EVC1	A0A1L8GPZ4	Sema domain-containing protein.	Sema domain-containing protein.	0.686
A0A1L8EVC1	A0A1L8GTN6	A0A1L8EVC1	A0A1L8GTN6	Sema domain-containing protein.	Sema domain-containing protein.	0.436
A0A1L8EVC1	A0A1L8GTQ8	A0A1L8EVC1	A0A1L8GTQ8	Sema domain-containing protein.	Uncharacterized protein.	0.436
A0A1L8EVC1	A0A1L8GZI2	A0A1L8EVC1	A0A1L8GZI2	Sema domain-containing protein.	Sema domain-containing protein.	0.436
A0A1L8EVC1	A0A1L8H680	A0A1L8EVC1	A0A1L8H680	Sema domain-containing protein.	Sema domain-containing protein.	0.436
A0A1L8EVC1	A0A1L8HE13	A0A1L8EVC1	A0A1L8HE13	Sema domain-containing protein.	Sema domain-containing protein.	0.436
A0A1L8EVC1	A0A310U4D3	A0A1L8EVC1	A0A310U4D3	Sema domain-containing protein.	Uncharacterized protein.	0.686
A0A1L8EVC1	Met.L	A0A1L8EVC1	A0A1L8GYT6	Sema domain-containing protein.	Uncharacterized protein.	0.643
A0A1L8EVC1	Met.S	A0A1L8EVC1	A0A1L8GU34	Sema domain-containing protein.	Uncharacterized protein.	0.643
A0A1L8EVC1	plxna1	A0A1L8EVC1	A0A1L8GPU4	Sema domain-containing protein.	Sema domain-containing protein.	0.436
A0A1L8EVC1	plxna3	A0A1L8EVC1	A0A1L8EZE4	Sema domain-containing protein.	Sema domain-containing protein.	0.436
A0A1L8EVC1	plxna3-2	A0A1L8EVC1	A0A1L8F5F6	Sema domain-containing protein.	Sema domain-containing protein.	0.436
A0A1L8EVC1	plxnb1	A0A1L8EVC1	A0A1L8GHW9	Sema domain-containing protein.	Sema domain-containing protein.	0.686
A0A1L8EVC1	plxnb2	A0A1L8EVC1	A0A1L8GU25	Sema domain-containing protein.	Sema domain-containing protein.	0.686
A0A1L8EVC1	plxnb2-2	A0A1L8EVC1	A0A1L8GZ01	Sema domain-containing protein.	Sema domain-containing protein.	0.686
A0A1L8EVC1	plxnb3	A0A1L8EVC1	A0A1L8F1R8	Sema domain-containing protein.	Sema domain-containing protein.	0.686
A0A1L8EVC1	plxnc1	A0A1L8EVC1	A0A1L8GYE3	Sema domain-containing protein.	Uncharacterized protein.	0.536