16 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pard6g-2	MGC80569 protein. (384 aa)
	map3k22	Uncharacterized protein. (625 aa)
	pard6b	Uncharacterized protein. (377 aa)
	map3k2	Uncharacterized protein. (611 aa)
	A0A1L8ESG6	Uncharacterized protein. (567 aa)
	pard6b-2	Uncharacterized protein. (376 aa)
	map3k2-2	Uncharacterized protein. (626 aa)
	A0A1L8FG56	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (590 aa)
	prkcz	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (590 aa)
	map3k22-2	Uncharacterized protein. (619 aa)
	pard6g	Uncharacterized protein. (384 aa)
	Prkci.L	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (588 aa)
	tfg	PB1 domain-containing protein. (410 aa)
	tfg-2	PB1 domain-containing protein. (402 aa)
	A0A310U4I1	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (588 aa)
	sqstm1	MGC64432 protein. (454 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ESG6	sqstm1	A0A1L8ESG6	Q6PGS1	Uncharacterized protein.	MGC64432 protein.	0.750
A0A1L8FG56	pard6b	A0A1L8FG56	A0A1L8ELH2	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.984
A0A1L8FG56	pard6b-2	A0A1L8FG56	A0A1L8ESP6	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.984
A0A1L8FG56	pard6g	A0A1L8FG56	A0A1L8FY89	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.984
A0A1L8FG56	pard6g-2	A0A1L8FG56	Q6GPA4	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	MGC80569 protein.	0.984
A0A1L8FG56	sqstm1	A0A1L8FG56	Q6PGS1	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	MGC64432 protein.	0.926
A0A310U4I1	pard6b	A0A310U4I1	A0A1L8ELH2	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.984
A0A310U4I1	pard6b-2	A0A310U4I1	A0A1L8ESP6	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.984
A0A310U4I1	pard6g	A0A310U4I1	A0A1L8FY89	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.984
A0A310U4I1	pard6g-2	A0A310U4I1	Q6GPA4	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	MGC80569 protein.	0.984
A0A310U4I1	sqstm1	A0A310U4I1	Q6PGS1	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	MGC64432 protein.	0.926
Prkci.L	pard6b	A0A1L8GAK2	A0A1L8ELH2	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.999
Prkci.L	pard6b-2	A0A1L8GAK2	A0A1L8ESP6	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.999
Prkci.L	pard6g	A0A1L8GAK2	A0A1L8FY89	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.987
Prkci.L	pard6g-2	A0A1L8GAK2	Q6GPA4	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	MGC80569 protein.	0.987
Prkci.L	sqstm1	A0A1L8GAK2	Q6PGS1	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	MGC64432 protein.	0.927
map3k2	map3k2-2	A0A1L8ENK5	A0A1L8EVE8	Uncharacterized protein.	Uncharacterized protein.	0.900
map3k2	sqstm1	A0A1L8ENK5	Q6PGS1	Uncharacterized protein.	MGC64432 protein.	0.704
map3k2-2	map3k2	A0A1L8EVE8	A0A1L8ENK5	Uncharacterized protein.	Uncharacterized protein.	0.900
map3k2-2	sqstm1	A0A1L8EVE8	Q6PGS1	Uncharacterized protein.	MGC64432 protein.	0.704