STRINGSTRING
ggt1-2 ggt1-2 ipo7 ipo7 mep1b mep1b gm2a gm2a LOC108644461 LOC108644461 h1-0 h1-0
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ggt1-2ML domain-containing protein. (222 aa)
ipo7Coagulation factor 2 (thrombin) receptor. (1037 aa)
mep1bMeprin A subunit. (722 aa)
gm2aGM2 ganglioside activator protein. (203 aa)
LOC108644461ML domain-containing protein. (195 aa)
h1-0Histone H1.0; Histones H1 are necessary for the condensation of nucleosome chains into higher-order structures. The histones H1.0 are found in cells that are in terminal stages of differentiation or that have low rates of cell division (By similarity). (196 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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