STRINGSTRING
sar1b sar1b ENSXETP00000001400 ENSXETP00000001400 cttn cttn arf3 arf3 rasl12 rasl12 arl5a arl5a surf4.2 surf4.2 arf11l.2 arf11l.2 lman1 lman1 gorasp2 gorasp2 lrrc14b-2 lrrc14b-2 copz1 copz1 blzf1 blzf1 arl6 arl6 copb2 copb2 PIGG PIGG cplx3 cplx3 SEC24D SEC24D JAM3 JAM3 copb1 copb1 sec31a sec31a gas2 gas2 arfgap1 arfgap1 rer1 rer1 higd1a-2 higd1a-2 SEC31B SEC31B sec23b sec23b golga2 golga2 kdelr1 kdelr1 cnih1 cnih1 tmed10 tmed10 arcn1 arcn1 golph3l golph3l sec24a sec24a copg1 copg1 gorasp1 gorasp1 tmed1 tmed1 urb1 urb1 golph3 golph3 surf4.1 surf4.1 tmed10l tmed10l kdelr2 kdelr2 tmed2 tmed2 LOC100491292 LOC100491292 sec24b sec24b jam2 jam2 arfgap2 arfgap2 tmf1 tmf1 arfgef2 arfgef2 ARFGEF1 ARFGEF1 arl1 arl1 cope cope golga1 golga1 ENSXETP00000034095 ENSXETP00000034095 cemip2 cemip2 preb preb ankle1 ankle1 clk1 clk1 SEC16B SEC16B brwd1 brwd1 or5b21 or5b21 mia3 mia3 abcc2 abcc2 AJM1 AJM1 sar1a sar1a gbf1 gbf1 RAB2A RAB2A mcfd2 mcfd2 sulf2 sulf2 kdelr3 kdelr3 smc2-2 smc2-2 hcls1 hcls1 PCSK9 PCSK9 golga5 golga5 copa copa ankrd40 ankrd40 miga1 miga1 arl4a arl4a tmed9 tmed9 arl5c arl5c zbtb34 zbtb34 ENSXETP00000050020 ENSXETP00000050020 gp25l gp25l tmed4 tmed4 znf484 znf484 prr15l prr15l COPZ2 COPZ2 arl4c arl4c sec16a sec16a sec23a sec23a copg2 copg2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sar1bMGC108053 protein; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
ENSXETP00000001400Uncharacterized protein. (227 aa)
cttnSH3 domain-containing protein. (569 aa)
arf3LOC100145191 protein; Belongs to the small GTPase superfamily. Arf family. (181 aa)
rasl12Solute carrier family 25 member 34. (273 aa)
arl5aDMRT like family A1; Belongs to the small GTPase superfamily. Arf family. (179 aa)
surf4.2Uncharacterized protein. (273 aa)
arf11l.2Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (188 aa)
lman1L-type lectin-like domain-containing protein. (538 aa)
gorasp2Golgi reassembly stacking protein 2. (424 aa)
lrrc14b-2tRNA methyltransferase 1 like. (87 aa)
copz1Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (177 aa)
blzf1N(alpha)-acetyltransferase 25, NatB auxiliary subunit. (404 aa)
arl6CDC like kinase 1; Belongs to the small GTPase superfamily. Arf family. (193 aa)
copb2Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (920 aa)
PIGGPhosphatidylinositol glycan anchor biosynthesis class G. (984 aa)
cplx3L-type lectin-like domain-containing protein. (472 aa)
SEC24DSEC24 homolog D, COPII coat complex component. (980 aa)
JAM3Junctional adhesion molecule 3. (298 aa)
copb1Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (963 aa)
sec31aPregnancy-specific beta-1-glycoprotein 3. (1261 aa)
gas2Forkhead box protein O1. (316 aa)
arfgap1Transmembrane protein 200A. (305 aa)
rer1Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (198 aa)
higd1a-2Solute carrier family 34 member 2. (1184 aa)
SEC31BSEC31 homolog B, COPII coat complex component. (1211 aa)
sec23bProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (767 aa)
golga2Mitochondrial ribosomal protein L21. (1034 aa)
kdelr1ER lumen protein-retaining receptor 2; Receptor for the C-terminal sequence motif K-D-E-L that is present on endoplasmic reticulum resident proteins and that mediates their recycling from the Golgi back to the endoplasmic reticulum (By similarity). Binding is pH dependent, and is optimal at pH 5-5.4 (By similarity). (212 aa)
cnih1Cornichon homolog (Drosophila). (144 aa)
tmed10Ectonucleotide pyrophosphatase/phosphodiesterase 7. (208 aa)
arcn1Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (545 aa)
golph3lGolgi phosphoprotein 3-like; Phosphatidylinositol-4-phosphate-binding protein that may play a role in the process of vesicle budding at the Golgi and anterograde transport to the plasma membrane. (280 aa)
sec24aElastin microfibril interfacer 1. (1122 aa)
copg1Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (874 aa)
gorasp1Golgi reassembly stacking protein 1. (417 aa)
tmed1Transmembrane emp24 domain-containing protein 1; Potential role in vesicular protein trafficking, mainly in the early secretory pathway. May act as a cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and may be involved in vesicle coat formation at the cytoplasmic side. (220 aa)
urb1Tetraspanin 1. (2293 aa)
golph3Golgi phosphoprotein 3 (Coat-protein). (290 aa)
surf4.1Surf4 protein. (269 aa)
tmed10lShroom family member 1. (206 aa)
kdelr2ER lumen protein-retaining receptor 1; Receptor for the C-terminal sequence motif K-D-E-L that is present on endoplasmic reticulum resident proteins and that mediates their recycling from the Golgi back to the endoplasmic reticulum. Belongs to the ERD2 family. (212 aa)
tmed2GOLD domain-containing protein. (208 aa)
LOC100491292Xyloside xylosyltransferase 1. (798 aa)
sec24bCaM kinase-like vesicle-associated. (1103 aa)
jam2Junctional adhesion molecule 2. (295 aa)
arfgap2ADP-ribosylation factor GTPase-activating protein 2; GTPase-activating protein (GAP) for ADP ribosylation factor 1 (ARF1). Implicated in coatomer-mediated protein transport between the Golgi complex and the endoplasmic reticulum. Hydrolysis of ARF1-bound GTP may lead to dissociation of coatomer from Golgi-derived membranes to allow fusion with target membranes (By similarity). (615 aa)
tmf1Transmembrane protein 179. (1110 aa)
arfgef2Dopamine receptor D2. (1792 aa)
ARFGEF1ADP ribosylation factor guanine nucleotide exchange factor 1. (1856 aa)
arl1Suppression of tumorigenicity 7 like; Belongs to the small GTPase superfamily. Arf family. (181 aa)
copeCoatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (315 aa)
golga1Phosducin like. (709 aa)
ENSXETP00000034095Uncharacterized protein. (66 aa)
cemip2Inhibin subunit alpha. (1385 aa)
prebRho GTPase activating protein 18. (296 aa)
ankle1Uncharacterized protein. (1380 aa)
clk1Dickkopf WNT signaling pathway inhibitor 3; Belongs to the protein kinase superfamily. (481 aa)
SEC16BSEC16 homolog B, endoplasmic reticulum export factor. (963 aa)
brwd1Chromatin assembly factor 1 subunit B. (1318 aa)
or5b21Olfactory receptor family 5 subfamily B member 21; Belongs to the small GTPase superfamily. Arf family. (185 aa)
mia3SH3 domain-containing protein. (2870 aa)
abcc2Ras homolog family member F (in filopodia). (1536 aa)
AJM1Apical junction component 1 homolog. (979 aa)
sar1aLectin, galactoside-binding, soluble, 4, gene 2; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
gbf1Olfactory receptor class II (xb178 gene). (1854 aa)
RAB2ARAB2A, member RAS oncogene family. (217 aa)
mcfd2Hypothetical LOC496472. (148 aa)
sulf2Extracellular sulfatase. (875 aa)
kdelr3ER lumen protein-retaining receptor 3; Receptor for the C-terminal sequence motif K-D-E-L that is present on endoplasmic reticulum resident proteins and that mediates their recycling from the Golgi back to the endoplasmic reticulum. (243 aa)
smc2-2Structural maintenance of chromosomes 2. (1957 aa)
hcls1Cortactin. (553 aa)
PCSK9Proprotein convertase subtilisin/kexin type 9. (684 aa)
golga5Phosphodiesterase 4D. (722 aa)
copaCoatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1240 aa)
ankrd40Homeobox-containing protein 10. (345 aa)
miga1Uncharacterized protein. (574 aa)
arl4aADP-ribosylation factor-like 4A. (200 aa)
tmed9GOLD domain-containing protein. (241 aa)
arl5cNovel protein similar to mouse ADP-ribosylation factor-like 12 Arl12; Belongs to the small GTPase superfamily. Arf family. (179 aa)
zbtb34Dedicator of cytokinesis 2. (490 aa)
ENSXETP00000050020SH3 domain-containing protein. (116 aa)
gp25lThreonine synthase like 1. (218 aa)
tmed4GOLD domain-containing protein. (228 aa)
znf484Nitric oxide synthase-interacting protein. (870 aa)
prr15lUncharacterized protein. (96 aa)
COPZ2Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (180 aa)
arl4cADP-ribosylation factor-like 7; Belongs to the small GTPase superfamily. Arf family. (193 aa)
sec16aProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2406 aa)
sec23aProtein transport protein Sec23A; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules for their transport to the Golgi complex. Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
copg2Coatomer subunit gamma-2; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). (883 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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