STRINGSTRING
rabac1 rabac1 yif1b yif1b thnsl2-2 thnsl2-2 kctd16 kctd16 yipf5 yipf5 alms1 alms1 yipf2 yipf2 cox6a1-2 cox6a1-2 ier3ip1 ier3ip1 yipf1 yipf1 SLC12A2 SLC12A2 tvp23b tvp23b tmem60 tmem60 ENSXETP00000053338 ENSXETP00000053338 tvp23a tvp23a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rabac1PRA1 family protein. (186 aa)
yif1bProtein YIF1B. (307 aa)
thnsl2-2Protein YIPF. (284 aa)
kctd16LSM11, U7 small nuclear RNA associated. (428 aa)
yipf5Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi; Belongs to the YIP1 family. (259 aa)
alms1ALMS_motif domain-containing protein. (2906 aa)
yipf2Protein YIPF. (325 aa)
cox6a1-2Peptidase S1 domain-containing protein. (137 aa)
ier3ip1Uncharacterized protein. (81 aa)
yipf1Protein YIPF. (302 aa)
SLC12A2Solute carrier family 12 member 2. (1181 aa)
tvp23bGolgi apparatus membrane protein TVP23 homolog. (205 aa)
tmem60Phospholipase C gamma 1. (134 aa)
ENSXETP00000053338annotation not available (146 aa)
tvp23aGolgi apparatus membrane protein TVP23 homolog. (207 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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