STRINGSTRING
st6gal1-2 st6gal1-2 VSX2 VSX2 ENSXETP00000032512 ENSXETP00000032512 LOC100485335 LOC100485335 six3 six3 pou4f1.2 pou4f1.2 atoh7 atoh7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
st6gal1-2ST6 beta-galactosamide alpha-2,6-sialyltranferase 1. (120 aa)
VSX2Visual system homeobox 2. (377 aa)
ENSXETP00000032512Paired domain-containing protein. (163 aa)
LOC100485335Poly(A) polymerase alpha. (281 aa)
six3Transmembrane protein 136. (295 aa)
pou4f1.2POU domain protein. (412 aa)
atoh7Peptidylprolyl isomerase like 6. (139 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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