STRINGSTRING
hnrnpa2b1 hnrnpa2b1 hnrnpa1 hnrnpa1 rbmx rbmx tardbp tardbp ewsr1 ewsr1 ilf3 ilf3 fus fus hnrnpu hnrnpu dhx9 dhx9 matr3 matr3 HNRNPM HNRNPM hnrnpk hnrnpk hnrnpa3 hnrnpa3 khdrbs1 khdrbs1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hnrnpa2b1Uncharacterized protein. (355 aa)
hnrnpa1Pleckstrin and Sec7 domain containing 3. (362 aa)
rbmxRRM domain-containing protein. (370 aa)
tardbpTAR DNA-binding protein 43; Probably involved in transcriptional repression (By similarity). May play a role in the maintenance of the circadian clock periodicity. (418 aa)
ewsr1Uncharacterized protein. (673 aa)
ilf3Interleukin enhancer-binding factor 3; RNA-binding protein that plays an essential role in the biogenesis of circular RNAs (circRNAs) which are produced by back- splicing circularization of pre-mRNAs. Within the nucleus, promotes circRNAs processing by stabilizing the regulatory elements residing in the flanking introns of the circularized exons. Plays thereby a role in the back-splicing of a subset of circRNAs. As a consequence, participates in a wide range of transcriptional and post- transcriptional processes. Binds to poly-U elements and AU-rich elements (AREs) in the 3'-UTR of tar [...] (1042 aa)
fusUncharacterized protein. (547 aa)
hnrnpuHeterogeneous nuclear ribonucleoprotein U (Scaffold attachment factor A). (790 aa)
dhx9U4/U6 small nuclear ribonucleoprotein Prp31. (1257 aa)
matr3Transcription factor 3. (892 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (729 aa)
hnrnpkHeterogeneous nuclear ribonucleoprotein K. (399 aa)
hnrnpa3Deuterosome assembly protein 1. (383 aa)
khdrbs1Phosducin. (377 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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