STRINGSTRING
igf3 igf3 m6pr m6pr bace1 bace1 gga1 gga1 sorl1 sorl1 bace2 bace2 IGF2R IGF2R gga3 gga3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
igf3Aldehyde dehydrogenase 1 family member B1. (126 aa)
m6prTrophoblast glycoprotein like. (272 aa)
bace1Beta-site APP-cleaving enzyme 1; Belongs to the peptidase A1 family. (502 aa)
gga1SLC9A3 regulator 2. (634 aa)
sorl1Tubulin tyrosine ligase like 4. (2146 aa)
bace2Gastrin; Belongs to the peptidase A1 family. (504 aa)
IGF2RInsulin like growth factor 2 receptor. (2400 aa)
gga3Uncharacterized protein. (706 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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