STRINGSTRING
ADAMTS20 ADAMTS20 urah urah urad urad allc allc uox uox rbp1 rbp1 ccn3 ccn3 adamts12 adamts12 adamts1 adamts1 ADAMTS7 ADAMTS7 STRA6 STRA6 scarf1 scarf1 rbp4 rbp4 LOC100498039 LOC100498039 INO80D INO80D ttr ttr
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADAMTS20ADAM metallopeptidase with thrombospondin type 1 motif 20. (1866 aa)
urah5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (143 aa)
uradVascular endothelial growth factor A. (175 aa)
allcAllantoicase; Utilization of purines as secondary nitrogen sources, when primary sources are limiting. (389 aa)
uoxUricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family. (304 aa)
rbp1Target of EGR1, exonuclease; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (136 aa)
ccn3Superoxide dismutase [Cu-Zn]. (344 aa)
adamts12ADAM metallopeptidase domain 10. (1540 aa)
adamts1Nudix hydrolase 1. (979 aa)
ADAMTS7ADAM metallopeptidase with thrombospondin type 1 motif 7. (1561 aa)
STRA6Stimulated by retinoic acid 6. (637 aa)
scarf1Tumor protein p53 binding protein 2. (890 aa)
rbp4MGC107934 protein; Belongs to the calycin superfamily. Lipocalin family. (199 aa)
LOC100498039Protoporphyrinogen oxidase. (496 aa)
INO80DINO80 complex subunit D. (1024 aa)
ttrTransthyretin; Thyroid hormone-binding protein, with a much higher binding affinity for triiodothyronine (T3) than for thyroxine (T4). Probably transports triiodothyronine from the bloodstream to the brain (By similarity); Belongs to the transthyretin family. (151 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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