STRINGSTRING
uxs1 uxs1 GNPDA1 GNPDA1 ugdhl ugdhl ugdh ugdh galm galm pgm3 pgm3 TGDS TGDS gfpt2 gfpt2 NAGK NAGK LOC100496329 LOC100496329 LOC100145002 LOC100145002 gnpda2 gnpda2 gnpnat1 gnpnat1 galt galt pmm1 pmm1 uap1l1 uap1l1 galk1 galk1 mpi mpi pmm2 pmm2 gmds gmds uap1 uap1 amdhd2 amdhd2 gale gale gmppa gmppa gmppb gmppb galk2 galk2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uxs1UDP-glucuronic acid decarboxylase 1; Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity). (421 aa)
GNPDA1Glucosamine-6-phosphate isomerase. (289 aa)
ugdhlUDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (507 aa)
ugdhUDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (503 aa)
galmAldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (342 aa)
pgm3Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family. (544 aa)
TGDSTDP-glucose 4,6-dehydratase. (349 aa)
gfpt2Uncharacterized protein. (685 aa)
NAGKN-acetylglucosamine kinase. (380 aa)
LOC100496329PPC domain-containing protein. (168 aa)
LOC100145002NTP_transferase domain-containing protein. (271 aa)
gnpda2Glucosamine-6-phosphate isomerase 2. (278 aa)
gnpnat1Glucosamine 6-phosphate N-acetyltransferase. (184 aa)
galtGalP_UDP_tr_C domain-containing protein. (187 aa)
pmm1Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (250 aa)
uap1l1UDP-N-acetylhexosamine pyrophosphorylase-like protein 1; Belongs to the UDPGP type 1 family. (495 aa)
galk1Leucine-rich repeat transmembrane protein FLRT3. (391 aa)
mpiMannose-6-phosphate isomerase. (423 aa)
pmm2Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (280 aa)
gmdsNAD(P)-bd_dom domain-containing protein. (369 aa)
uap1Mitogen-activated protein kinase kinase 1. (527 aa)
amdhd2Amidohydro-rel domain-containing protein. (455 aa)
galeUDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (350 aa)
gmppaMannose-1-phosphate guanyltransferase alpha; May serve as a regulatory subunit and allow allosteric feedback inhibition of GMPPB by GDP-mannose; Belongs to the transferase hexapeptide repeat family. (427 aa)
gmppbMannose-1-phosphate guanyltransferase beta; Catalyzes the formation of GDP-mannose, an essential precursor of glycan moieties of glycoproteins and glycolipids. (429 aa)
galk2Uncharacterized protein. (465 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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