STRINGSTRING
bptf bptf rsf1 rsf1 smarca1 smarca1 smarca5 smarca5 BAZ1A BAZ1A chrac1 chrac1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bptfAnillin actin binding protein. (3008 aa)
rsf1Sterol O-acyltransferase 2. (1424 aa)
smarca1Annexin A4. (1025 aa)
smarca5Methyltransferase like 6. (1049 aa)
BAZ1ABromodomain adjacent to zinc finger domain 1A. (1570 aa)
chrac1Fructose-bisphosphatase 2. (143 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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