STRINGSTRING
fstl3 fstl3 MYOC MYOC TNFAIP6 TNFAIP6 LOC100490139 LOC100490139 ctsk ctsk ctsk-2 ctsk-2 LOC594890 LOC594890 itgav itgav vegfa vegfa ccdc80 ccdc80 LOC100494590 LOC100494590 LOC100124852 LOC100124852 LOC105945585 LOC105945585 ENSXETP00000028545 ENSXETP00000028545 THBS1 THBS1 itgb3 itgb3 ITGA4 ITGA4 ctss ctss usp19-2 usp19-2 LOC100490361 LOC100490361
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fstl3Follistatin-like 3 (Secreted glycoprotein). (255 aa)
MYOCMyocilin. (499 aa)
TNFAIP6TNF alpha induced protein 6. (269 aa)
LOC100490139Harbinger transposase derived 1; Belongs to the peptidase C1 family. (331 aa)
ctskMidkine; Belongs to the peptidase C1 family. (345 aa)
ctsk-2Uncharacterized protein; Belongs to the peptidase C1 family. (336 aa)
LOC594890SET domain containing 1A; Belongs to the peptidase C1 family. (333 aa)
itgavRAB5B, member RAS oncogene family; Belongs to the integrin alpha chain family. (1034 aa)
vegfaGID complex subunit 8; Belongs to the PDGF/VEGF growth factor family. (311 aa)
ccdc80Uncharacterized protein. (956 aa)
LOC100494590LIM homeobox 9; Belongs to the peptidase C1 family. (343 aa)
LOC100124852LOC100124852 protein; Belongs to the peptidase C1 family. (333 aa)
LOC105945585Nuclear receptor coactivator 5; Belongs to the peptidase C1 family. (332 aa)
ENSXETP00000028545Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (189 aa)
THBS1Thrombospondin 1. (1188 aa)
itgb3Integrin beta; Belongs to the integrin beta chain family. (800 aa)
ITGA4Integrin subunit alpha 4; Belongs to the integrin alpha chain family. (1030 aa)
ctssAnoctamin 1, calcium activated chloride channel; Belongs to the peptidase C1 family. (333 aa)
usp19-2Ubiquitin specific peptidase 19; Belongs to the peptidase C1 family. (331 aa)
LOC100490361Leucine-rich repeat and fibronectin type III domain-containing 4. (349 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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