STRINGSTRING
smurf2 smurf2 hivep1 hivep1 lrrc32.1 lrrc32.1 inhbc.1 inhbc.1 WNT1 WNT1 bmp2 bmp2 smad9 smad9 bmp6 bmp6 smpd5l smpd5l msx1 msx1 INHBA INHBA GDF7 GDF7 GLG1 GLG1 gdf6 gdf6 smad2 smad2 MTMR4 MTMR4 SMAD6 SMAD6 smad3 smad3 SMAD7 SMAD7 usp15 usp15 nlk nlk rbm14 rbm14 fkbp8 fkbp8 JUN JUN ventx1.2 ventx1.2 BMP10 BMP10 csgalnact1-2 csgalnact1-2 bmp7.2 bmp7.2 gdf5 gdf5 slc33a1 slc33a1 ENSXETP00000010102 ENSXETP00000010102 gdf1 gdf1 lef1 lef1 TGFB2 TGFB2 acvr1b acvr1b ENSXETP00000011922 ENSXETP00000011922 acvr1 acvr1 SKI SKI AMH AMH chrd.1 chrd.1 bmper bmper HJV HJV acvr2b acvr2b pxn pxn fam83g fam83g nodal nodal mstn.2 mstn.2 mstn.1 mstn.1 appl2 appl2 bmp4 bmp4 fos fos smurf1 smurf1 LOC100492768 LOC100492768 appl1 appl1 tgfbr2 tgfbr2 nrros nrros BMPR1A BMPR1A tab1 tab1 JADE2 JADE2 sfrp2 sfrp2 stat3.2 stat3.2 pdcd4 pdcd4 chst11 chst11 stat3.1 stat3.1 rgmb rgmb lefty lefty bmp7.1 bmp7.1 sec62-2 sec62-2 tgfb1 tgfb1 INHBC INHBC spart spart dlx5 dlx5 LOC101730723 LOC101730723 LOC448531 LOC448531 Smad6.2 Smad6.2 ENSXETP00000025869 ENSXETP00000025869 nlk.2 nlk.2 bmp15 bmp15 admp admp bmp5 bmp5 LOC101734414 LOC101734414 eng eng tmem100 tmem100 rnf111 rnf111 tgfb1i1 tgfb1i1 ventx1.1 ventx1.1 ventx3.1 ventx3.1 ventx3.2 ventx3.2 mms19 mms19 jund.2 jund.2 gdf3 gdf3 smad4.1 smad4.1 twsg1 twsg1 acvr1c acvr1c cdh5 cdh5 INHBB INHBB ddx5 ddx5 acvrl1 acvrl1 foxh1 foxh1 tspan2-2 tspan2-2 PPM1L PPM1L fst fst bmp3 bmp3 ATOH8 ATOH8 hpgd hpgd ism2 ism2 tgfbr1 tgfbr1 Znf831 Znf831 cldn5 cldn5 bmpr1b bmpr1b skil skil smpd3 smpd3 tp53 tp53 GDF2 GDF2 gdf10 gdf10 ncoa6-2 ncoa6-2 bambi bambi admp2 admp2 foxf1 foxf1 smad1 smad1 nceh1 nceh1 acvr2a acvr2a inha inha nodal5 nodal5 nvl-2 nvl-2 LOC101734231 LOC101734231 LOC101734157 LOC101734157 nodal6 nodal6 bmp8 bmp8 WFIKKN2 WFIKKN2 ITGB8 ITGB8 b3galnt2 b3galnt2 sostdc1 sostdc1 cited1 cited1 mettl23 mettl23 cav2 cav2 sirt1 sirt1 tdgf1.3 tdgf1.3 tdgf1.2 tdgf1.2 tdgf1.1 tdgf1.1 gdf11.1 gdf11.1 mreg mreg TGFBR3 TGFBR3 BMPR2 BMPR2 nodal-2 nodal-2 nodal2 nodal2 nodal1 nodal1 gdf5-2 gdf5-2 rgma rgma ptprk ptprk itgb6 itgb6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smurf2Bcl2 modifying factor. (577 aa)
hivep1Cytoplasmic polyadenylation element-binding protein 3. (2591 aa)
lrrc32.15-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled. (666 aa)
inhbc.1Piwi-like RNA-mediated gene silencing 4. (367 aa)
WNT1Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (372 aa)
bmp2Armadillo like helical domain containing 3. (398 aa)
smad9Mothers against decapentaplegic homolog. (466 aa)
bmp6Enhancer of mRNA decapping 4. (441 aa)
smpd5lUncharacterized protein. (523 aa)
msx1Potassium channel, two pore domain subfamily K, member 18. (275 aa)
INHBAInhibin subunit beta A. (411 aa)
GDF7Growth differentiation factor 7. (414 aa)
GLG1Golgi glycoprotein 1. (1148 aa)
gdf6Erb-b2 receptor tyrosine kinase 3. (396 aa)
smad2Mothers against decapentaplegic homolog. (467 aa)
MTMR4Myotubularin related protein 4. (1093 aa)
SMAD6Mothers against decapentaplegic homolog. (352 aa)
smad3Mothers against decapentaplegic homolog. (461 aa)
SMAD7Mothers against decapentaplegic homolog. (382 aa)
usp15Ubiquitin carboxyl-terminal hydrolase 15; Hydrolase that removes conjugated ubiquitin from target proteins and regulates various pathways such as the TGF-beta receptor signaling and NF-kappa-B pathways. Acts as a key regulator of TGF-beta receptor signaling pathway, but the precise mechanism is still unclear: according to a report, acts by promoting deubiquitination of monoubiquitinated R-SMADs, thereby alleviating inhibition of R-SMADs and promoting activation of TGF-beta target genes. According to another reports, regulates the TGF-beta receptor signaling pathway by mediating deubiqu [...] (982 aa)
nlkSerine/threonine-protein kinase NLK2; Negatively regulates Wnt/beta-catenin-signaling during development. Plays a role together with sox11 in neural induction during early embryogenesis. Involved in TGFbeta-mediated mesoderm induction in early embryos, acting downstream of map3k7/tak1 to phosphorylate stat3. Augments the rnf138/narf-directed ubiquitination and degradation of tcf/lef by enhancing the association of rnf138/narf and tcf/lef. Phosphorylates mef2a to play a role in anterior neural development, including eye formation (By similarity). (534 aa)
rbm14Uncharacterized protein. (468 aa)
fkbp8Peptidylprolyl isomerase. (408 aa)
JUNJun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (312 aa)
ventx1.2Homeobox protein vent1; Transcriptional repressor. Cooperates with vent2 in a ventral signaling pathway downstream of bmp4, which antagonizes the Spemann organizer and dorsal mesoderm formation, and leads to ventral mesoderm formation. Acts downstream of bmp4 to repress transcription of foxa4- B/XFD-1'. Binds to DNA with preference for the target sequence 5'- CTATT[T/C]G-3'. Also binds 5'-TGCATTTTG-3' at a lower frequency, and occasionally 5'-TTGATC-3'. Binds to the homeobox 2 (HBX2) repressor element in the promoter of the myf5 gene (By similarity). Cooperates with vent2 to repress my [...] (262 aa)
BMP10Bone morphogenetic protein 10. (421 aa)
csgalnact1-2Chemerin chemokine-like receptor 1. (132 aa)
bmp7.2Nuclear receptor subfamily 5 group A member 1. (436 aa)
gdf5Growth differentiation factor 5. (496 aa)
slc33a1Phospholipid phosphatase 3. (538 aa)
ENSXETP00000010102TGF_BETA_2 domain-containing protein. (294 aa)
gdf1Vg1. (361 aa)
lef1HMG box domain-containing protein. (415 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (418 aa)
acvr1bSerine/threonine kinase 17a. (530 aa)
ENSXETP00000011922Mapk-regulated corepressor-interacting protein 1. (101 aa)
acvr1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (568 aa)
SKISKI proto-oncogene. (719 aa)
AMHAnti-Mullerian hormone. (606 aa)
chrd.1Chordin; Belongs to the chordin family. (942 aa)
bmperUncharacterized protein. (741 aa)
HJVHemojuvelin BMP co-receptor. (402 aa)
acvr2bSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (542 aa)
pxnPaxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family. (579 aa)
fam83gGlucosidase, alpha; neutral C. (949 aa)
nodalRibosomal protein S12. (418 aa)
mstn.2Ubiquitin associated protein 2. (374 aa)
mstn.1Lin-37 DREAM MuvB core complex component. (369 aa)
appl2Alveolar soft part sarcoma chromosome region, candidate 1. (664 aa)
bmp4Zinc finger, HIT-type-containing 6. (469 aa)
fosV-fos FBJ murine osteosarcoma viral oncogene homolog. (368 aa)
smurf1E3 ubiquitin-protein ligase. (748 aa)
LOC100492768Peptidylprolyl isomerase. (424 aa)
appl1K(lysine) acetyltransferase 8. (685 aa)
tgfbr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (728 aa)
nrrosCytoskeleton associated protein 5. (679 aa)
BMPR1AReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (528 aa)
tab1Allograft inflammatory factor 1-like. (650 aa)
JADE2Uncharacterized protein. (853 aa)
sfrp2Secreted frizzled-related protein 2. (295 aa)
stat3.2STAT_int domain-containing protein. (408 aa)
pdcd4Uncharacterized protein. (486 aa)
chst11Carbohydrate sulfotransferase. (352 aa)
stat3.1Signal transducer and activator of transcription. (715 aa)
rgmbAcetoacetyl-CoA synthetase. (459 aa)
leftyLeft-right determination factor. (365 aa)
bmp7.1TGF_BETA_2 domain-containing protein. (425 aa)
sec62-2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (461 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (387 aa)
INHBCInhibin subunit beta C. (340 aa)
spartMIT domain-containing protein. (592 aa)
dlx5Nuclear factor of activated T cells 3. (298 aa)
LOC101730723Fork-head domain-containing protein. (236 aa)
LOC448531HGF activator. (260 aa)
Smad6.2MH2 domain-containing protein. (206 aa)
ENSXETP00000025869UPAR/Ly6 domain-containing protein. (117 aa)
nlk.2Serine/threonine-protein kinase NLK2. (336 aa)
bmp15Intraflagellar transport 74. (379 aa)
admpNovel protein similar to anti-dorsalizing morphogenic protein. (390 aa)
bmp5Apoptosis antagonizing transcription factor. (449 aa)
LOC101734414One cut homeobox 1, gene 2. (229 aa)
engUncharacterized protein. (622 aa)
tmem100Serine protease 1. (132 aa)
rnf111E3 ubiquitin-protein ligase arkadia; E3 ubiquitin-protein ligase required for mesoderm patterning during embryonic development (By similarity). Acts as an enhancer of the transcriptional responses of the smad2/smad3 effectors, which are activated downstream of BMP. Acts by mediating ubiquitination and degradation of SMAD inhibitors such as smad7, inducing their proteasomal degradation and thereby enhancing the transcriptional activity of TGF-beta and BMP. Specifically binds polysumoylated chains via SUMO interaction motifs (SIMs) and mediates ubiquitination of sumoylated substrates (By [...] (981 aa)
tgfb1i1Transforming growth factor beta-1-induced transcript 1 protein; Functions as a molecular adapter coordinating multiple protein-protein interactions at the focal adhesion complex and in the nucleus. Links various intracellular signaling modules to plasma membrane receptors and regulates the Wnt and TGFB signaling pathways. (503 aa)
ventx1.1Homeobox domain-containing protein. (278 aa)
ventx3.1Ventx3.1 protein. (273 aa)
ventx3.2Homeobox protein vex1; Transcriptional repressor. Acts in a ventral signaling pathway downstream of bmp4 to antagonize the Spemann organizer and ventrally pattern the embryonic mesoderm. Represses transcription of the dorsal genes gsc and otx2 (By similarity). (282 aa)
mms19MMS19 nucleotide excision repair protein homolog; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into apoproteins specifically involved in DNA metabolism and genomic integrity. In the CIA complex, MMS19 acts as an adapter between early-acting CIA components and a subset of cellular target iron-sulfur proteins (By similarity). (1048 aa)
jund.2mRNA export factor. (448 aa)
gdf3Derriere protein; Required for posterior mesoderm formation during embryogenesis. Acts indirectly to suppress head formation by altering mesodermal patterning. Also involved in the establishment of left-right axis asymmetry, acting upstream of nodal/nr-1. Can exert long-range effects in the embryo (By similarity). (354 aa)
smad4.1Mothers against decapentaplegic homolog. (579 aa)
twsg1Uncharacterized protein. (339 aa)
acvr1cReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (537 aa)
cdh5Zinc finger RNA-binding protein; Cadherins are calcium-dependent cell adhesion proteins. (772 aa)
INHBBInhibin subunit beta B. (131 aa)
ddx5Uncharacterized protein; Belongs to the DEAD box helicase family. (618 aa)
acvrl1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (490 aa)
foxh1Forkhead box protein H1; Transcriptional activator. Recognizes and binds to the DNA sequence 5'-TGT[GT][GT]ATT-3'. Upon TGF-beta induction, forms a transcriptionally active complex with smad2 and smad4 called activin- responsive factor 1 (ARF1), which binds a site on the mix-B/mix.2 promoter called the activin response element (ARE). Binds to activated smads and the ARE with much lower affinity than fast3. Necessary for the first steps in mesoderm specification, directly inducing mesodermal genes. Acts with fast3 to control the convergent extension movements of gastrulation. Binds to t [...] (515 aa)
tspan2-2Adaptor related protein complex 1 subunit mu 1. (634 aa)
PPM1LProtein phosphatase, Mg2+/Mn2+ dependent 1L. (360 aa)
fstChloride channel, voltage-sensitive 6. (343 aa)
bmp3Bone morphogenetic protein 3; Belongs to the TGF-beta family. (458 aa)
ATOH8Atonal bHLH transcription factor 8. (246 aa)
hpgdArmadillo repeat containing 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (264 aa)
ism2AMOP domain-containing protein. (455 aa)
tgfbr1Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (501 aa)
Znf831Uncharacterized protein. (1264 aa)
cldn5Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (216 aa)
bmpr1bReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (532 aa)
skilc-SKI_SMAD_bind domain-containing protein. (643 aa)
smpd3Barttin CLCNK-type chloride channel accessory beta subunit. (659 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (362 aa)
GDF2Growth differentiation factor 2. (410 aa)
gdf10Bone morphogenetic protein 3; Belongs to the TGF-beta family. (442 aa)
ncoa6-2USP domain-containing protein; Belongs to the peptidase C19 family. (2558 aa)
bambiBMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family. (260 aa)
admp2TGF_BETA_2 domain-containing protein. (432 aa)
foxf1Forkhead box protein F1; Probable transcription factor. Required for smooth muscle (visceral mesoderm) differentiation during gut development. Also required for normal proliferation of the lateral plate mesoderm. Acts as a downstream mediator of bmp4-signaling (By similarity). (373 aa)
smad1Mothers against decapentaplegic homolog. (464 aa)
nceh1Uncharacterized protein. (409 aa)
acvr2aSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (522 aa)
inhaInhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family. (371 aa)
nodal5Polypeptide N-acetylgalactosaminyltransferase 7. (386 aa)
nvl-2Nuclear VCP like. (393 aa)
LOC101734231Protein phosphatase, Mg2+/Mn2+ dependent 1F. (386 aa)
LOC101734157TGF_BETA_2 domain-containing protein. (386 aa)
nodal6TGF_BETA_2 domain-containing protein. (382 aa)
bmp8TGF_BETA_2 domain-containing protein. (419 aa)
WFIKKN2WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2. (559 aa)
ITGB8Integrin beta; Belongs to the integrin beta chain family. (726 aa)
b3galnt2UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2; Beta-1,3-N-acetylgalactosaminyltransferase that synthesizes a unique carbohydrate structure, GalNAc-beta-1-3GlcNAc, on N- and O- glycans. Has no galactose nor galactosaminyl transferase activity toward any acceptor substrate. Involved in alpha-dystroglycan (dag1) glycosylation (By similarity); Belongs to the glycosyltransferase 31 family. (534 aa)
sostdc1Transmembrane protein 52. (213 aa)
cited1Crystallin alpha A. (142 aa)
mettl23Methyltransferase like 23. (175 aa)
cav2Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (160 aa)
sirt1Thrombospondin-type laminin G domain and EAR repeats. (707 aa)
tdgf1.3Cripto, FRL-1, cryptic family 1. (190 aa)
tdgf1.2CFC domain-containing protein. (197 aa)
tdgf1.1EGF-like domain-containing protein. (174 aa)
gdf11.1ATR interacting protein. (425 aa)
mregMelanoregulin; Probably functions as cargo-recognition protein that couples cytoplasmic vesicles to the transport machinery. Contributes to retrograde melanosome transport from the cell periphery to the center. Overexpression causes accumulation of late endosomes and/or lysosomes at the microtubule organising center (MTOC) at the center of the cell. Probably binds cholesterol and requires the presence of cholesterol in membranes to function in microtubule-mediated retrograde organelle transport. Binds phosphatidylinositol 3-phosphate, phosphatidylinositol 4-phosphate, phosphatidylinosi [...] (270 aa)
TGFBR3Transforming growth factor beta receptor 3. (864 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1053 aa)
nodal-2Nodal homolog 3-C; Exhibits mesoderm-dorsalizing activity and neural-inducing activity, but lacks mesoderm-inducing activity. Regulates the expression of specific mesodermal and neural genes. Induces convergent extension movements at the embryonic midline by activating the fgf signaling pathway to induce t/bra expression in the organizer region. Acts with wnt11 to induce Spemann organizer cells and induce axis formation (By similarity). The unprocessed protein antagonizes bmp- signaling; Belongs to the TGF-beta family. (403 aa)
nodal2Neurotrophic receptor tyrosine kinase 3. (405 aa)
nodal1Nodal homolog; Cooperation and regulatory loops of multiple nodals are essential for mesendoderm patterning in early embryos. Essential for mesoderm formation and axial patterning during embryonic development. Activates the activin-like signaling pathway to induce dorsal and ventral mesoderm in animal cap ectoderm. In addition, also dorsalizes ventral marginal zone (VMZ) tissues during gastrulation. Acts in a downstream signaling cascade via cripto and cer1 to mediate cardiogenesis in embryonic mesoderm. Directs the orientation of the left-right axis by driving the left-specific gene c [...] (403 aa)
gdf5-2Growth differentiation factor 5. (1420 aa)
rgmaPre-mRNA-splicing factor SPF27. (459 aa)
ptprkEstrogen related receptor gamma. (1462 aa)
itgb6Integrin beta; Belongs to the integrin beta chain family. (782 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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