STRINGSTRING
RBMS2 RBMS2 ssb ssb dazap1 dazap1 pabpc1 pabpc1 elavl1 elavl1 msi1 msi1 rbms3 rbms3 sgk1 sgk1 fmr1 fmr1 iqsec2 iqsec2 msi2 msi2 pabpc1l pabpc1l pnpt1 pnpt1 rbm11 rbm11 pabpc4 pabpc4 mcrs1 mcrs1 atxn1 atxn1 rbms1 rbms1 khdrbs1 khdrbs1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RBMS2RNA binding motif single stranded interacting protein 2. (396 aa)
ssbSjogren syndrome antigen B (Autoantigen La). (426 aa)
dazap1Uncharacterized protein. (407 aa)
pabpc1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (664 aa)
elavl1ELAV-like protein 1; RNA-binding protein that binds to the 3'-UTR region of mRNAs and increases their stability. Involved in embryonic stem cells (ESCs) differentiation: preferentially binds mRNAs that are not methylated by N6-methyladenosine (m6A), stabilizing them, promoting ESCs differentiation (By similarity). Binds to poly-U elements and AU-rich elements (AREs) in the 3'-UTR of target mRNAs. Acts cooperatively with cribp to stabilize AU-rich sequence (ARE)-containing mRNAs. May play a role during gastrulation. Required for the vegetal localization of vg1 mRNA (By similarity). (336 aa)
msi1Uncharacterized protein. (347 aa)
rbms3N(alpha)-acetyltransferase 40, NatD catalytic subunit. (436 aa)
sgk1Serine/threonine-protein kinase Sgk1; Protein kinase that may play an important role in cellular stress response (By similarity). Plays an important role in activating certain potassium, sodium, and chloride channels, suggesting an involvement in the regulation of processes such as cell survival, neuronal excitability, and renal sodium excretion; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (504 aa)
fmr1Synaptic functional regulator FMR1; Multifunctional polyribosome-associated RNA-binding protein that plays a central role in neuronal development and synaptic plasticity through the regulation of alternative mRNA splicing, mRNA stability, mRNA dendritic transport and postsynaptic local protein synthesis of a subset of mRNAs. Binds poly(G) and poly(U), and to a lower extent poly(A) and poly(C). ECO:0000250|UniProtKB:P51113, ECO:0000250|UniProtKB:Q06787. (590 aa)
iqsec2ERO1-like protein alpha. (262 aa)
msi2Potassium voltage-gated channel subfamily J member 4. (407 aa)
pabpc1lEmbryonic polyadenylate-binding protein; Binds and protects the poly(A) tail of mRNA with or without an AU-rich element (ARE) and prevents mRNA deadenylation. Stimulates the translation of mRNAs to which it is bound during early development (By similarity). (635 aa)
pnpt1F-box DNA helicase 1. (789 aa)
rbm11LOC100124814 protein. (243 aa)
pabpc4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (654 aa)
mcrs1Microspherule protein 1. (453 aa)
atxn1Polymerase (RNA) II subunit H. (792 aa)
rbms1Uncharacterized protein. (410 aa)
khdrbs1Phosducin. (377 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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