STRINGSTRING
acer2 acer2 pomt1 pomt1 gata1 gata1 aatf aatf pxylp1 pxylp1 ramp1 ramp1 chp1 chp1 necab1 necab1 LOC100489507 LOC100489507 ACOT8 ACOT8 BCL2 BCL2 TM9SF2 TM9SF2 itm2b itm2b itm2a itm2a ctnnb1 ctnnb1 ncstn ncstn crppa crppa CCR7 CCR7 PAWR PAWR necab3 necab3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
acer2Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (275 aa)
pomt1Mitochondrial ribosomal protein L20. (735 aa)
gata1GATA-binding protein 1. (363 aa)
aatfUncharacterized protein. (518 aa)
pxylp12-phosphoxylose phosphatase 1; Responsible for the 2-O-dephosphorylation of xylose in the glycosaminoglycan-protein linkage region of proteoglycans thereby regulating the amount of mature glycosaminoglycan (GAG) chains. Sulfated glycosaminoglycans (GAGs), including heparan sulfate and chondroitin sulfate, are synthesized on the so-called common GAG- protein linkage region (GlcUAbeta1-3Galbeta1-3Galbeta1-4Xylbeta1-O-Ser) of core proteins, which is formed by the stepwise addition of monosaccharide residues by the respective specific glycosyltransferases. Xylose 2-O-dephosphorylation duri [...] (501 aa)
ramp1Uncharacterized protein. (148 aa)
chp1Calcium binding protein P22. (193 aa)
necab1LOC100125028 protein. (349 aa)
LOC100489507Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (679 aa)
ACOT8Acyl-CoA thioesterase 8. (317 aa)
BCL2BCL2 apoptosis regulator. (293 aa)
TM9SF2Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (700 aa)
itm2bIntegral membrane protein 2B. (257 aa)
itm2aGlucose-6-phosphate isomerase. (247 aa)
ctnnb1Dynactin subunit 5. (788 aa)
ncstnCathepsin G. (592 aa)
crppaD-ribitol-5-phosphate cytidylyltransferase; Cytidylyltransferase required for protein O-linked mannosylation (By similarity). Catalyzes the formation of CDP-ribitol nucleotide sugar from D-ribitol 5-phosphate. CDP-ribitol is a substrate of FKTN during the biosynthesis of the phosphorylated O-mannosyl trisaccharide (N-acetylgalactosamine-beta-3-N-acetylglucosamine-beta-4- (phosphate-6-)mannose), a carbohydrate structure present in alpha- dystroglycan (DAG1), which is required for binding laminin G-like domain-containing extracellular proteins with high affinity (By similarity). Shows ac [...] (411 aa)
CCR7C-C motif chemokine receptor 7; Belongs to the G-protein coupled receptor 1 family. (358 aa)
PAWRPro-apoptotic WT1 regulator. (344 aa)
necab3Centrosomal protein 170kDa. (358 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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