STRINGSTRING
emilin1 emilin1 vsir vsir LOC100488329 LOC100488329 DDR2 DDR2 SUCO SUCO SERPINF2 SERPINF2 ddr2l ddr2l rgcc rgcc tgfb1 tgfb1 cygb cygb Il6 Il6 mfap4.1 mfap4.1 grb14-2 grb14-2 rad51d-2 rad51d-2 CREB3L1 CREB3L1 f2 f2 errfi1 errfi1 larp6-like.1 larp6-like.1 larp6 larp6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
emilin1Uncharacterized protein. (1057 aa)
vsirHypothetical LOC496981. (289 aa)
LOC100488329Fibrinogen C-terminal domain-containing protein. (259 aa)
DDR2Discoidin domain receptor tyrosine kinase 2. (856 aa)
SUCOSUN domain containing ossification factor. (1232 aa)
SERPINF2Serpin family F member 2; Belongs to the serpin family. (594 aa)
ddr2lDiscoidin domain receptor family, member 2. (879 aa)
rgccDual specificity phosphatase 11 (RNA/RNP complex 1-interacting), gene 2. (128 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (387 aa)
cygbCytoglobin; Belongs to the globin family. (179 aa)
Il6Uncharacterized protein. (150 aa)
mfap4.1Fibrinogen C-terminal domain-containing protein. (254 aa)
grb14-2Growth factor receptor bound protein 14. (238 aa)
rad51d-2RAD51 paralog D. (249 aa)
CREB3L1cAMP responsive element binding protein 3 like 1. (467 aa)
f2Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (607 aa)
errfi1CD53 molecule. (404 aa)
larp6-like.1Acheron. (481 aa)
larp6SHC SH2-domain binding protein 1. (793 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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