STRINGSTRING
nkx6-2 nkx6-2 mag mag ENSXETP00000027334 ENSXETP00000027334 acy3 acy3 synj1 synj1 il34 il34 Il6 Il6 SOX8 SOX8 tgfb1 tgfb1 serpine2 serpine2 tenm4 tenm4 VEGFC VEGFC mecp2 mecp2 aspa aspa UFL1 UFL1 nkx6-1 nkx6-1 rnf112.1 rnf112.1 tnf tnf clcf1 clcf1 abca4-3 abca4-3 mtor mtor IL6ST IL6ST tp73 tp73 lyn lyn ptn ptn camta2-2 camta2-2 slc7a5 slc7a5 gsx2 gsx2 PTPRZ1 PTPRZ1 il1b il1b spint1 spint1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nkx6-2Zinc finger AN1-type containing 1. (281 aa)
magPolymerase (DNA directed), epsilon 2, accessory subunit. (657 aa)
ENSXETP00000027334Uncharacterized protein. (600 aa)
acy3N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming); Plays an important role in deacetylating mercapturic acids in kidney proximal tubules; Belongs to the AspA/AstE family. Aspartoacylase subfamily. (310 aa)
synj1Stathmin 3. (1548 aa)
il34Uncharacterized protein. (193 aa)
Il6Uncharacterized protein. (150 aa)
SOX8SRY-box transcription factor 8. (466 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (387 aa)
serpine2SERPIN domain-containing protein; Belongs to the serpin family. (424 aa)
tenm4Uncharacterized protein. (2596 aa)
VEGFCVascular endothelial growth factor C. (407 aa)
mecp2Kruppel-like factor 17. (466 aa)
aspaAspartoacylase; Catalyzes the deacetylation of N-acetylaspartic acid (NAA) to produce acetate and L-aspartate; Belongs to the AspA/AstE family. Aspartoacylase subfamily. (313 aa)
UFL1UFM1 specific ligase 1. (794 aa)
nkx6-1Meis homeobox 1. (348 aa)
rnf112.1Vesicle associated membrane protein 2. (628 aa)
tnfThyrotropin-releasing hormone receptor 3. (227 aa)
clcf1Cardiotrophin-like cytokine factor 1. (223 aa)
abca4-3ATP binding cassette subfamily A member 4. (174 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2534 aa)
IL6STInterleukin 6 signal transducer. (948 aa)
tp73Tumor protein p73; Participates in the apoptotic response to DNA damage. Isoforms containing the transactivation domain are pro-apoptotic, isoforms lacking the domain are anti-apoptotic and block the function of p53 and transactivating p73 isoforms. May be a tumor suppressor protein. (632 aa)
lynTyrosine-protein kinase. (524 aa)
ptnGlycine receptor alpha 3. (190 aa)
camta2-2Calmodulin binding transcription activator 2. (254 aa)
slc7a5Dolichyl-phosphate mannosyltransferase polypeptide 3. (511 aa)
gsx2Hexokinase 2. (248 aa)
PTPRZ1Protein tyrosine phosphatase receptor type Z1. (2276 aa)
il1bInterleukin-1; Belongs to the IL-1 family. (286 aa)
spint1Retinaldehyde binding protein 1. (511 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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