STRINGSTRING
cdh26 cdh26 CDH7 CDH7 CDH18 CDH18 cdh9 cdh9 CDH1 CDH1 cdh15 cdh15 cdh11 cdh11 CDH22 CDH22 mettl1 mettl1 apc apc LOC100492690 LOC100492690 cdh19 cdh19 LOC100485633 LOC100485633 apc2 apc2 CDH12 CDH12 CDH10 CDH10 cdh6 cdh6 jup jup CDH24 CDH24 cdh20 cdh20 cdh17 cdh17 cdh5 cdh5 cdh8 cdh8 ctnna2 ctnna2 cdh13 cdh13 ctnnb1 ctnnb1 cdh2 cdh2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cdh26Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (880 aa)
CDH7Cadherin 7; Cadherins are calcium-dependent cell adhesion proteins. (783 aa)
CDH18Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins. (787 aa)
cdh9Contactin associated protein-like 5; Cadherins are calcium-dependent cell adhesion proteins. (796 aa)
CDH1Cadherin 1; Cadherins are calcium-dependent cell adhesion proteins. (934 aa)
cdh15Lysophosphatidic acid receptor 3; Cadherins are calcium-dependent cell adhesion proteins. (814 aa)
cdh11Solute carrier family 4 member 11; Cadherins are calcium-dependent cell adhesion proteins. (801 aa)
CDH22Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. (795 aa)
mettl1tRNA (guanine-N(7)-)-methyltransferase A; Methyltransferase that mediates the formation of N(7)- methylguanine in a subset of RNA species, such as tRNAs, mRNAs and microRNAs (miRNAs). Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Also acts as a methyltransferase for a subset of internal N(7)-methylguanine in mRNAs. Internal N(7)- methylguanine methylation of mRNAs regulates translation. Also methylates a specific subset of miRNAs. (287 aa)
apcZinc finger DHHC-type containing 1. (2833 aa)
LOC100492690Eukaryotic translation initiation factor 3 subunit F. (856 aa)
cdh19Fibroblast growth factor receptor substrate 2; Cadherins are calcium-dependent cell adhesion proteins. (758 aa)
LOC100485633Fatty acid amide hydrolase, gene 2; Cadherins are calcium-dependent cell adhesion proteins. (889 aa)
apc2Transmembrane protein 11. (2325 aa)
CDH12Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins. (795 aa)
CDH10Cadherin 10; Cadherins are calcium-dependent cell adhesion proteins. (787 aa)
cdh6Solute carrier family 35 member G1; Cadherins are calcium-dependent cell adhesion proteins. (794 aa)
jupUncharacterized protein. (750 aa)
CDH24Cadherin 24; Cadherins are calcium-dependent cell adhesion proteins. (623 aa)
cdh20E74 like ETS transcription factor 5; Cadherins are calcium-dependent cell adhesion proteins. (804 aa)
cdh17Retinol binding protein 3. (830 aa)
cdh5Zinc finger RNA-binding protein; Cadherins are calcium-dependent cell adhesion proteins. (772 aa)
cdh8Feline leukemia virus subgroup C cellular receptor 1; Cadherins are calcium-dependent cell adhesion proteins. (799 aa)
ctnna2Catenin alpha-2; May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system; Belongs to the vinculin/alpha-catenin family. (965 aa)
cdh13C-type lectin domain family 2 member D. (720 aa)
ctnnb1Dynactin subunit 5. (788 aa)
cdh2Jumonji domain containing 6; Cadherins are calcium-dependent cell adhesion proteins. (929 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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