STRINGSTRING
STAP1 STAP1 alkal2 alkal2 BTC BTC ALKAL1 ALKAL1 DGKQ DGKQ pak2 pak2 dtnb-2 dtnb-2 ltk ltk tgfa tgfa ALK ALK gas6 gas6 epgn epgn clec3b-2 clec3b-2 abi1 abi1 grem1 grem1 ereg ereg areg areg nrg1 nrg1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STAP1Signal transducing adaptor family member 1. (216 aa)
alkal2Huntingtin interacting protein 1 related. (157 aa)
BTCBetacellulin. (170 aa)
ALKAL1ALK and LTK ligand 1. (168 aa)
DGKQDiacylglycerol kinase. (956 aa)
pak2Non-specific serine/threonine protein kinase. (518 aa)
dtnb-2Dystrobrevin beta. (329 aa)
ltkTyrosine-protein kinase receptor. (1126 aa)
tgfaSolute carrier family 6 (neurotransmitter transporter), member 8 like. (163 aa)
ALKTyrosine-protein kinase receptor. (1258 aa)
gas6Homeobox protein CDX-1. (672 aa)
epgnLeucine-rich repeats and calponin homology (CH) domain containing 1. (138 aa)
clec3b-2Uncharacterized protein. (1371 aa)
abi1Uncharacterized protein. (502 aa)
grem1Gremlin. (182 aa)
eregNIMA-related kinase 6. (156 aa)
aregEGF-like domain-containing protein. (226 aa)
nrg1GATA zinc finger domain containing 2A. (621 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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