STRINGSTRING
LOC100485322 LOC100485322 CARMIL1 CARMIL1 NPHS1 NPHS1 baiap2 baiap2 CDC42EP1 CDC42EP1 fchsd2 fchsd2 mtor mtor rictor rictor nck1 nck1 LOC100124990 LOC100124990 fchsd1 fchsd1 vasp vasp BAIAP2L2 BAIAP2L2 baiap2l1 baiap2l1 cdc42ep2 cdc42ep2 NCKAP1 NCKAP1 evl evl TENM1 TENM1 BAG4 BAG4 ENSXETP00000000456 ENSXETP00000000456 cdc42ep4 cdc42ep4 LOC101733520 LOC101733520 arf6 arf6 CRACD CRACD LOC733735 LOC733735 ENSXETP00000011099 ENSXETP00000011099 snx9 snx9 tpm3 tpm3 cdc42ep3 cdc42ep3 nck2 nck2 pycard pycard csf3 csf3 LMOD1 LMOD1 nckap1l nckap1l
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100485322Phosphoglycerate mutase 1. (545 aa)
CARMIL1Capping protein regulator and myosin 1 linker 1. (1392 aa)
NPHS1NPHS1 adhesion molecule, nephrin. (1078 aa)
baiap2Uncharacterized protein. (554 aa)
CDC42EP1CRIB domain-containing protein. (321 aa)
fchsd2Transmembrane protein 209. (774 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2534 aa)
rictorSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1. (1707 aa)
nck1Cytoplasmic protein. (377 aa)
LOC100124990Rho GTPase activating protein 20. (234 aa)
fchsd1Cartilage intermediate layer protein 2. (665 aa)
vaspNeuraminidase 1 (lysosomal sialidase). (365 aa)
BAIAP2L2BAI1 associated protein 2 like 2. (285 aa)
baiap2l1Protocadherin 11 X-linked. (517 aa)
cdc42ep2Cdc42 effector protein 2; Probably involved in the organization of the actin cytoskeleton; Belongs to the BORG/CEP family. (213 aa)
NCKAP1NCK associated protein 1. (1134 aa)
evlSolute carrier family 30 (zinc transporter), member 9. (712 aa)
TENM1Teneurin transmembrane protein 1. (2761 aa)
BAG4BCL2 associated athanogene 4. (405 aa)
ENSXETP00000000456Uncharacterized protein. (198 aa)
cdc42ep4CDC42 effector protein (Rho GTPase binding) 4. (305 aa)
LOC101733520C-C motif chemokine. (91 aa)
arf6Solute carrier family 8 (sodium/calcium exchanger), member 1; Belongs to the small GTPase superfamily. Arf family. (229 aa)
CRACDKIAA1211. (1190 aa)
LOC733735CRIB domain-containing protein. (304 aa)
ENSXETP00000011099Uncharacterized protein. (197 aa)
snx9Sorting nexin. (585 aa)
tpm3Tropomyosin 3. (197 aa)
cdc42ep3CDC42 effector protein (Rho GTPase binding) 3. (254 aa)
nck2Cytoplasmic protein. (381 aa)
pycardFamily with sequence similarity 84 member B. (199 aa)
csf3Receptor accessory protein 6. (210 aa)
LMOD1Leiomodin 1. (550 aa)
nckap1lInhibitor of growth family member 1. (1165 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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