STRINGSTRING
nf2 nf2 npr3 npr3 eif2ak2 eif2ak2 TMEM119 TMEM119 SOX8 SOX8 itgav itgav lrp5 lrp5 mn1 mn1 LOC100485014 LOC100485014 gata1 gata1 ccn1 ccn1 hpse hpse ENSXETP00000003801 ENSXETP00000003801 pkr3 pkr3 cthrc1 cthrc1 grem1 grem1 itgb3 itgb3 TNN TNN atraid atraid BCL2 BCL2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nf2FERM domain-containing protein. (635 aa)
npr3Chromosome 20 open reading frame 194. (508 aa)
eif2ak2Retinol dehydrogenase 7, gene 2. (557 aa)
TMEM119Transmembrane protein 119. (287 aa)
SOX8SRY-box transcription factor 8. (466 aa)
itgavRAB5B, member RAS oncogene family; Belongs to the integrin alpha chain family. (1034 aa)
lrp5Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1634 aa)
mn1Cytochrome P450 family 11 subfamily B member 2. (1210 aa)
LOC100485014FERM domain-containing protein. (507 aa)
gata1GATA-binding protein 1. (363 aa)
ccn1Histone deacetylase 2. (376 aa)
hpseLOC100145320 protein. (531 aa)
ENSXETP00000003801Putative transmembrane protein TA-2. (399 aa)
pkr3Uncharacterized protein. (473 aa)
cthrc1Diacylglycerol kinase, zeta. (235 aa)
grem1Gremlin. (182 aa)
itgb3Integrin beta; Belongs to the integrin beta chain family. (800 aa)
TNNTenascin N. (1093 aa)
atraidUncharacterized protein. (266 aa)
BCL2BCL2 apoptosis regulator. (293 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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