STRINGSTRING
wdtc1 wdtc1 slc4a10 slc4a10 sp2 sp2 RARB RARB tnks2 tnks2 rmi1 rmi1 UNC79 UNC79 atf5 atf5 atf5.2 atf5.2 ctc1 ctc1 clec3b-2 clec3b-2 tp53 tp53 smpd3 smpd3 scnn1b scnn1b ercc2 ercc2 pkdcc.1 pkdcc.1 ATM ATM CCDC151 CCDC151 XRCC2 XRCC2 apba1 apba1 SLC1A2 SLC1A2 stil stil Ankrd12 Ankrd12 mtor mtor slitrk6 slitrk6 slitrk1 slitrk1 zmpste24 zmpste24 CCM2 CCM2 clic5 clic5 LOC100496635 LOC100496635 tmed2 tmed2 ar ar TTC8 TTC8 hoxa5 hoxa5 kdm6a kdm6a ATRX ATRX pkdcc.2 pkdcc.2 tns2 tns2 ercc1 ercc1 HELT HELT LOC100492768 LOC100492768 TAL2 TAL2 sos1 sos1 WDR11 WDR11 fkbp8 fkbp8 rbbp6 rbbp6 SMO SMO ANKRD11 ANKRD11 ep300 ep300 rarg rarg palb2 palb2 smpd5l smpd5l rara rara
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
wdtc1Transmembrane protein 178, gene 2. (671 aa)
slc4a10Anion exchange protein. (1187 aa)
sp2Troponin T2, cardiac type. (569 aa)
RARBRetinoic acid receptor beta. (474 aa)
tnks2Poly [ADP-ribose] polymerase. (1236 aa)
rmi1DUF1767 domain-containing protein. (509 aa)
UNC79Unc-79 homolog, NALCN channel complex subunit. (2557 aa)
atf5BZIP domain-containing protein. (311 aa)
atf5.2Tubulin tyrosine ligase like11. (311 aa)
ctc1Mitogen-activated protein kinase 1. (1047 aa)
clec3b-2Uncharacterized protein. (1371 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (362 aa)
smpd3Barttin CLCNK-type chloride channel accessory beta subunit. (659 aa)
scnn1bSodium channel, nonvoltage-gated 1, beta; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (646 aa)
ercc2Epoxide hydrolase 3. (760 aa)
pkdcc.1Heterogeneous nuclear ribonucleoprotein L. (457 aa)
ATMNon-specific serine/threonine protein kinase. (3060 aa)
CCDC151Coiled-coil domain containing 151. (562 aa)
XRCC2X-ray repair cross complementing 2. (221 aa)
apba1Acyl-CoA synthetase short chain family member 1. (924 aa)
SLC1A2Amino acid transporter. (588 aa)
stilUncharacterized protein. (1282 aa)
Ankrd12Ankyrin repeat domain 12. (2011 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2534 aa)
slitrk6Fibromodulin. (826 aa)
slitrk1LOC100124997 protein. (696 aa)
zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (472 aa)
CCM2CCM2 scaffold protein. (450 aa)
clic5Chloride intracellular channel 4. (252 aa)
LOC100496635Amino acid transporter. (580 aa)
tmed2GOLD domain-containing protein. (208 aa)
arTransforming acidic coiled-coil containing protein 3. (788 aa)
TTC8Tetratricopeptide repeat domain 8. (516 aa)
hoxa5Proteasome subunit beta 7. (274 aa)
kdm6aUncharacterized protein. (1450 aa)
ATRXATRX chromatin remodeler. (2268 aa)
pkdcc.2PIP49_C domain-containing protein. (241 aa)
tns2Erythrocyte membrane protein band 4.1-like 1. (1239 aa)
ercc1Uncharacterized protein. (302 aa)
HELTHelt bHLH transcription factor. (252 aa)
LOC100492768Peptidylprolyl isomerase. (424 aa)
TAL2TAL bHLH transcription factor 2. (102 aa)
sos1Organic solute transporter subunit alpha. (1329 aa)
WDR11WD repeat domain 11. (1099 aa)
fkbp8Peptidylprolyl isomerase. (408 aa)
rbbp6Uncharacterized protein. (2038 aa)
SMOSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (815 aa)
ANKRD11Ankyrin repeat domain 11. (2761 aa)
ep300Suv3 like RNA helicase. (2493 aa)
rargNucleoporin like 2. (476 aa)
palb2PALB2_WD40 domain-containing protein. (1417 aa)
smpd5lUncharacterized protein. (523 aa)
raraUncharacterized protein. (564 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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