STRINGSTRING
ptpn1 ptpn1 rps3 rps3 dusp19 dusp19 slc7a2.2-2 slc7a2.2-2 sash1 sash1 MAP3K7 MAP3K7 ror2 ror2 syk syk tnf tnf edn1 edn1 MAP3K12 MAP3K12 map3k13 map3k13 map2k7 map2k7 map3k4 map3k4 FZD4 FZD4 ern2 ern2 fzd5 fzd5 fzd8 fzd8 dkk1 dkk1 TNFRSF11A TNFRSF11A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ptpn1Tyrosine-protein phosphatase non-receptor type. (449 aa)
rps3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (246 aa)
dusp19Dual specificity phosphatase 19. (215 aa)
slc7a2.2-2Uncoupling protein 1. (1393 aa)
sash1Amyloid beta precursor protein (cytoplasmic tail) binding protein 2. (1003 aa)
MAP3K7Mitogen-activated protein kinase kinase kinase 7. (594 aa)
ror2Receptor tyrosine kinase-like orphan receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily. (930 aa)
sykTyrosine-protein kinase. (611 aa)
tnfThyrotropin-releasing hormone receptor 3. (227 aa)
edn1Nidogen 2. (222 aa)
MAP3K12Mitogen-activated protein kinase kinase kinase. (814 aa)
map3k13Mitogen-activated protein kinase kinase kinase. (963 aa)
map2k7TBC1 domain family member 23. (470 aa)
map3k4EPH receptor B1. (1544 aa)
FZD4Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family. (523 aa)
ern2Endoplasmic reticulum to nucleus signaling 2. (957 aa)
fzd5Zinc finger DHHC-type containing 9; Belongs to the G-protein coupled receptor Fz/Smo family. (559 aa)
fzd8Frizzled class receptor 8; Belongs to the G-protein coupled receptor Fz/Smo family. (580 aa)
dkk1Dickkopf 1. (257 aa)
TNFRSF11ATNF receptor superfamily member 11a. (579 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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