STRINGSTRING
smyd1 smyd1 ripor2 ripor2 akirin1 akirin1 hif1an hif1an lrrc8a lrrc8a boc boc myog myog cuzd1.2 cuzd1.2 RANBP3L RANBP3L xkr8 xkr8 TNFSF14 TNFSF14 myf5 myf5 myf6 myf6 rbm24 rbm24 cdon cdon
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smyd1Uncharacterized protein. (497 aa)
ripor2PL48 domain-containing protein. (1063 aa)
akirin1Akirin-1. (186 aa)
hif1anHypoxia-inducible factor 1, alpha subunit inhibitor. (352 aa)
lrrc8aCWC27 spliceosome-associated protein. (809 aa)
bocFKBP prolyl isomerase 15. (993 aa)
myogMyogenin. (236 aa)
cuzd1.2Myogenic factor. (508 aa)
RANBP3LRAN binding protein 3 like. (520 aa)
xkr8XK-related protein. (566 aa)
TNFSF14TNF superfamily member 14; Belongs to the tumor necrosis factor family. (171 aa)
myf5Myogenic factor. (255 aa)
myf6Myogenic factor. (241 aa)
rbm24RNA-binding protein 24; Multifunctional RNA-binding protein involved in the regulation of pre-mRNA splicing, mRNA stability and mRNA translation important for cell fate decision and differentiation. Plays a major role in pre-mRNA alternative splicing regulation. Mediates preferentially muscle-specific exon inclusion in numerous mRNAs important for striated cardiac and skeletal muscle cell differentiation. Binds to intronic splicing enhancer (ISE) composed of stretches of GU-rich motifs localized in flanking intron of exon that will be included by alternative splicing. Involved in embry [...] (226 aa)
cdonPaired box 7. (1192 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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