STRINGSTRING
fbrs fbrs WAPL WAPL lig4 lig4 PDGFC PDGFC WNT1 WNT1 fosl2 fosl2 DDR2 DDR2 JUN JUN cdk4 cdk4 e2f1 e2f1 cdca4-2 cdca4-2 ddr2l ddr2l cdk6 cdk6 cd74 cd74 sirt6 sirt6 pdgfb-2 pdgfb-2 tgfb1 tgfb1 cdc6 cdc6 cd248 cd248 abca4-3 abca4-3 ereg ereg jund.2 jund.2 dhx9 dhx9 ndufs4 ndufs4 brk1 brk1 pla2g1bl pla2g1bl gas6 gas6 fndc3b fndc3b ctc1 ctc1 WNT2B WNT2B itgb3 itgb3 esr1 esr1 WNT2 WNT2 fn1 fn1 myc myc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fbrsCBFA2/RUNX1 translocation partner 3. (894 aa)
WAPLWAPL cohesin release factor. (1178 aa)
lig4DNA ligase. (911 aa)
PDGFCPlatelet derived growth factor C; Belongs to the PDGF/VEGF growth factor family. (347 aa)
WNT1Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (372 aa)
fosl2Transmembrane p24 trafficking protein 2. (316 aa)
DDR2Discoidin domain receptor tyrosine kinase 2. (856 aa)
JUNJun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (312 aa)
cdk4Coiled-coil domain containing 151; Belongs to the protein kinase superfamily. (321 aa)
e2f1TEA domain family member 1 (SV40 transcriptional enhancer factor). (428 aa)
cdca4-2Phospholipase A(2). (142 aa)
ddr2lDiscoidin domain receptor family, member 2. (879 aa)
cdk6Epidermal growth factor receptor pathway substrate 15; Belongs to the protein kinase superfamily. (333 aa)
cd74Synovial sarcoma translocation gene on chromosome 18-like 1. (291 aa)
sirt6Sirtuin (Silent mating type information regulation 2 homolog) 6. (331 aa)
pdgfb-2Frizzled related protein; Belongs to the PDGF/VEGF growth factor family. (240 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (387 aa)
cdc6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (595 aa)
cd248Iroquois-class homeodomain protein irx-4. (726 aa)
abca4-3ATP binding cassette subfamily A member 4. (174 aa)
eregNIMA-related kinase 6. (156 aa)
jund.2mRNA export factor. (448 aa)
dhx9U4/U6 small nuclear ribonucleoprotein Prp31. (1257 aa)
ndufs4Uncharacterized protein. (169 aa)
brk1Anoctamin 9. (170 aa)
pla2g1blPhospholipase A(2). (150 aa)
gas6Homeobox protein CDX-1. (672 aa)
fndc3bDermatopontin. (1205 aa)
ctc1Mitogen-activated protein kinase 1. (1047 aa)
WNT2BProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (392 aa)
itgb3Integrin beta; Belongs to the integrin beta chain family. (800 aa)
esr1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (585 aa)
WNT2Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (365 aa)
fn1Fibronectin 1. (2475 aa)
mycTranscriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. (418 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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