STRINGSTRING
shisa9 shisa9 slc4a10 slc4a10 cln3 cln3 syap1 syap1 LOC108644813 LOC108644813 SHISA7 SHISA7 shisa8 shisa8 rab3gap1 rab3gap1 syt4 syt4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
shisa9Protein shisa-9; Regulator of short-term neuronal synaptic plasticity in the dentate gyrus. Associates with AMPA receptors (ionotropic glutamate receptors) in synaptic spines and promotes AMPA receptor desensitization at excitatory synapses (By similarity). (390 aa)
slc4a10Anion exchange protein. (1187 aa)
cln3Uncharacterized protein. (579 aa)
syap1Synapse associated protein 1, SAP47 homolog. (364 aa)
LOC108644813Uncharacterized protein. (300 aa)
SHISA7Shisa family member 7. (504 aa)
shisa8Ring finger protein 216. (381 aa)
rab3gap1Ribosomal protein S20. (914 aa)
syt4Uncharacterized protein. (424 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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