(14 nodes) Clathrin coat assembly network (Xenopus tropicalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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protein homology

Your Input:
	ENSXETP00000038388	Uncharacterized protein. (101 aa)
	cltc	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1692 aa)
	sgip1	Semaphorin 5B. (734 aa)
	picalm	Fukutin. (722 aa)
	hip1r	Uncharacterized protein. (1066 aa)
	snap91	ENTH domain-containing protein. (909 aa)
	DAB2	DAB adaptor protein 2. (820 aa)
	fcho1	P21 protein (Cdc42/Rac)-activated kinase 6. (906 aa)
	cltcl1	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1693 aa)
	nsg1	DDB1- and CUL4-associated factor 13. (185 aa)
	serinc2-2	Nucleoporin NUP188 homolog. (683 aa)
	HIP1	Huntingtin interacting protein 1. (737 aa)
	nsg2	Major facilitator superfamily domain containing 3. (182 aa)
	fcho2	Uncharacterized protein. (816 aa)

Your Current Organism:

Xenopus tropicalis

NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAB2	fcho1	ENSXETP00000013209	ENSXETP00000015343	DAB adaptor protein 2.	P21 protein (Cdc42/Rac)-activated kinase 6.	0.475
DAB2	fcho2	ENSXETP00000013209	ENSXETP00000041991	DAB adaptor protein 2.	Uncharacterized protein.	0.475
DAB2	hip1r	ENSXETP00000013209	ENSXETP00000002040	DAB adaptor protein 2.	Uncharacterized protein.	0.505
DAB2	sgip1	ENSXETP00000013209	ENSXETP00000049157	DAB adaptor protein 2.	Semaphorin 5B.	0.401
HIP1	cltc	ENSXETP00000037328	ENSXETP00000046538	Huntingtin interacting protein 1.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.673
HIP1	cltcl1	ENSXETP00000037328	ENSXETP00000024395	Huntingtin interacting protein 1.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.673
HIP1	hip1r	ENSXETP00000037328	ENSXETP00000002040	Huntingtin interacting protein 1.	Uncharacterized protein.	0.526
HIP1	picalm	ENSXETP00000037328	ENSXETP00000000033	Huntingtin interacting protein 1.	Fukutin.	0.449
HIP1	serinc2-2	ENSXETP00000037328	ENSXETP00000028280	Huntingtin interacting protein 1.	Nucleoporin NUP188 homolog.	0.449
HIP1	snap91	ENSXETP00000037328	ENSXETP00000007048	Huntingtin interacting protein 1.	ENTH domain-containing protein.	0.525
cltc	HIP1	ENSXETP00000046538	ENSXETP00000037328	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Huntingtin interacting protein 1.	0.673
cltc	cltcl1	ENSXETP00000046538	ENSXETP00000024395	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.900
cltc	hip1r	ENSXETP00000046538	ENSXETP00000002040	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.673
cltc	picalm	ENSXETP00000046538	ENSXETP00000000033	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Fukutin.	0.458
cltc	serinc2-2	ENSXETP00000046538	ENSXETP00000028280	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Nucleoporin NUP188 homolog.	0.457
cltc	snap91	ENSXETP00000046538	ENSXETP00000007048	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	ENTH domain-containing protein.	0.458
cltcl1	HIP1	ENSXETP00000024395	ENSXETP00000037328	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Huntingtin interacting protein 1.	0.673
cltcl1	cltc	ENSXETP00000024395	ENSXETP00000046538	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.900
cltcl1	hip1r	ENSXETP00000024395	ENSXETP00000002040	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Uncharacterized protein.	0.673
cltcl1	picalm	ENSXETP00000024395	ENSXETP00000000033	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Fukutin.	0.458

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