STRINGSTRING
LOC101733412 LOC101733412 fam3a fam3a spon2 spon2 jagn1 jagn1 bcl10 bcl10 LOC101734051 LOC101734051 rarres2 rarres2 card9 card9 il17rc il17rc cotl1 cotl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101733412EPS8 like 1. (594 aa)
fam3aFamily with sequence similarity 3, member A. (230 aa)
spon2Nedd4 family interacting protein 2. (345 aa)
jagn1Protein jagunal homolog 1; Endoplasmic reticulum transmembrane protein involved in vesicle-mediated transport, which is required for neutrophil function. Belongs to the jagunal family. (183 aa)
bcl10Solute carrier family 35 (GDP-fucose transporter), member C2. (236 aa)
LOC101734051Probable glutamate--tRNA ligase, mitochondrial. (152 aa)
rarres2Uncharacterized protein. (165 aa)
card9Polymerase (RNA) III (DNA directed) polypeptide G (32kD). (522 aa)
il17rcSEFIR domain-containing protein. (762 aa)
cotl1Coactosin-like 1 (Dictyostelium). (142 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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