STRINGSTRING
il1b il1b tnf tnf sox1 sox1 ABCD1 ABCD1 pnpla3 pnpla3 LOC105947943 LOC105947943 enpp7 enpp7 lonp2 lonp2 wdr83 wdr83 apoa4 apoa4 etfbkmt etfbkmt sirt6 sirt6 abcd2 abcd2 abhd5 abhd5 pak2-2 pak2-2 rarres2 rarres2 fign-2 fign-2 idh1 idh1 scarb1 scarb1 apoa5 apoa5 sorl1 sorl1 cidea cidea ENSXETP00000036750 ENSXETP00000036750 lrrn4cl lrrn4cl ENSXETP00000036764 ENSXETP00000036764 prkaa1 prkaa1 daglb daglb tysnd1 tysnd1 angptl3 angptl3 mlycd mlycd pnpla2 pnpla2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
il1bInterleukin-1; Belongs to the IL-1 family. (286 aa)
tnfThyrotropin-releasing hormone receptor 3. (227 aa)
sox13-phosphoinositide dependent protein kinase 1. (663 aa)
ABCD1ATP binding cassette subfamily D member 1. (761 aa)
pnpla3Patatin-like phospholipase domain-containing 3. (498 aa)
LOC105947943Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (193 aa)
enpp7Ectonucleotidase enpp7. (474 aa)
lonp2Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256|PROSITE-. (845 aa)
wdr83WD repeat domain-containing protein 83; Molecular scaffold protein for various multimeric protein complexes. Acts as a module in the assembly of a multicomponent scaffold for the ERK pathway, linking ERK responses to specific agonists. Also involved in response to hypoxia by acting as a negative regulator of HIF1A/HIF-1-alpha (By similarity); Belongs to the WD repeat MORG1 family. (314 aa)
apoa4Uncharacterized protein. (407 aa)
etfbkmtUncharacterized protein. (247 aa)
sirt6Sirtuin (Silent mating type information regulation 2 homolog) 6. (331 aa)
abcd2Scribbled planar cell polarity protein. (743 aa)
abhd5Abhydrolase domain containing 5. (371 aa)
pak2-2Uncharacterized protein. (433 aa)
rarres2Uncharacterized protein. (165 aa)
fign-2XK related 4. (56 aa)
idh1Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (482 aa)
scarb1Coagulation factor 12 (Hageman factor); Belongs to the CD36 family. (450 aa)
apoa5Uncharacterized protein. (343 aa)
sorl1Tubulin tyrosine ligase like 4. (2146 aa)
cideaCell death-inducing DFFA-like effector a. (221 aa)
ENSXETP00000036750Fibronectin type-III domain-containing protein. (248 aa)
lrrn4clFibronectin type-III domain-containing protein. (298 aa)
ENSXETP00000036764BSCL2 lipid droplet biogenesis associated, seipin. (322 aa)
prkaa1Non-specific serine/threonine protein kinase. (571 aa)
daglbPolymerase (RNA) III (DNA directed) polypeptide C (62kD). (679 aa)
tysnd1Serine protease; Belongs to the peptidase S1B family. (588 aa)
angptl3Carboxylesterase 3, gene 1. (456 aa)
mlycdLOC100145491 protein. (509 aa)
pnpla2DEAD-box helicase 56. (494 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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