STRINGSTRING
mapre2 mapre2 CLIP2 CLIP2 fam193b fam193b CKAP5 CKAP5 fam193a fam193a mapre1 mapre1 clip1 clip1 numa1 numa1 kif18a kif18a clip3 clip3 CLIP4 CLIP4 kif2c kif2c pafah1b1 pafah1b1 stim1 stim1 dctn1 dctn1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mapre2Uncharacterized protein. (328 aa)
CLIP2CAP-Gly domain containing linker protein 2. (1001 aa)
fam193bCyclin-Y-like protein 1. (632 aa)
CKAP5Cytoskeleton associated protein 5. (2003 aa)
fam193aChromosome 1 open reading frame 43. (1570 aa)
mapre1Microtubule-associated protein RP/EB family member 1; Plus-end tracking protein (+TIP) that binds to the plus-end of microtubules and regulates the dynamics of the microtubule cytoskeleton. Promotes cytoplasmic microtubule nucleation and elongation. May be involved in spindle function by stabilizing microtubules and anchoring them at centrosomes. Belongs to the MAPRE family. (302 aa)
clip1Uncharacterized protein. (2361 aa)
numa1Kynurenine aminotransferase 3. (2351 aa)
kif18aKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (947 aa)
clip3ANTXR cell adhesion molecule 1. (534 aa)
CLIP4CAP-Gly domain containing linker protein family member 4. (547 aa)
kif2cKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (715 aa)
pafah1b1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (414 aa)
stim1SAM domain-containing protein. (789 aa)
dctn1CAP-Gly domain-containing protein. (1290 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.