STRINGSTRING
mapkapk5 mapkapk5 dusp10 dusp10 LOC100496565 LOC100496565 sirt1 sirt1 cdk5rap3 cdk5rap3 PPM1D PPM1D gch1 gch1 tpr tpr mapkapk3 mapkapk3 mapkapk2 mapkapk2 NBR1 NBR1 tnip1 tnip1 dusp10.2 dusp10.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mapkapk5Protein kinase domain-containing protein. (494 aa)
dusp10NPC1 like 1. (464 aa)
LOC100496565Tektin 3. (228 aa)
sirt1Thrombospondin-type laminin G domain and EAR repeats. (707 aa)
cdk5rap3Uncharacterized protein. (505 aa)
PPM1DProtein phosphatase, Mg2+/Mn2+ dependent 1D. (551 aa)
gch1GTP cyclohydrolase 1. (247 aa)
tprSOS Ras/Rho guanine nucleotide exchange factor 2. (2324 aa)
mapkapk3Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (389 aa)
mapkapk2F-box and WD repeat domain containing 5; Belongs to the protein kinase superfamily. (412 aa)
NBR1NBR1 autophagy cargo receptor. (958 aa)
tnip1Nef-associated factor 1. (637 aa)
dusp10.2Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (419 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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