STRINGSTRING
PHF20 PHF20 pih1d1 pih1d1 kansl1 kansl1 kdm1a kdm1a kansl2 kansl2 amy2a-2 amy2a-2 NELFA NELFA wdr61 wdr61 LOC100491917 LOC100491917 macroh2a1 macroh2a1 MYB MYB ctr9 ctr9 brca1 brca1 znf335 znf335 AUTS2 AUTS2 smad4.1 smad4.1 ogt ogt dnmt1 dnmt1 kansl3 kansl3 snw1 snw1 bcor bcor ctnnb1 ctnnb1 gata3 gata3 mcrs1 mcrs1 KMT2E KMT2E rtf1 rtf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHF20PHD finger protein 20. (987 aa)
pih1d1Uncharacterized protein. (297 aa)
kansl1Obg-like ATPase 1. (863 aa)
kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (841 aa)
kansl2Cellular communication network factor 2. (530 aa)
amy2a-2Amylase, alpha 2A (pancreatic). (199 aa)
NELFANegative elongation factor complex member A. (543 aa)
wdr61WD repeat-containing protein 61. (305 aa)
LOC100491917Sphingosine kinase 2. (903 aa)
macroh2a1Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
MYBMYB proto-oncogene, transcription factor. (752 aa)
ctr9RNA polymerase-associated protein CTR9 homolog; Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II (By similarity). PAF1C associates with RNA polymerase II, is involved in transcriptional elongation and in histone modifications including methylation on histone H3 'Lys-4' (H3K4me3) (By similarity). (1149 aa)
brca1Leucine rich repeat containing 18. (1655 aa)
znf335Prostate transmembrane protein, androgen induced 1. (1426 aa)
AUTS2Activator of transcription and developmental regulator AUTS2. (1047 aa)
smad4.1Mothers against decapentaplegic homolog. (579 aa)
ogtEnolase 4. (1073 aa)
dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1492 aa)
kansl3Uncharacterized protein. (1086 aa)
snw1Kelch repeat and BTB domain-containing protein 8. (549 aa)
bcorRadial spoke head component 1. (1687 aa)
ctnnb1Dynactin subunit 5. (788 aa)
gata3Uncharacterized protein. (454 aa)
mcrs1Microspherule protein 1. (453 aa)
KMT2ELysine methyltransferase 2E. (1800 aa)
rtf1Plus3 domain-containing protein. (675 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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