STRINGSTRING
zfpm2 zfpm2 sav1 sav1 SMAD7 SMAD7 acvr1 acvr1 NSD2 NSD2 tgfbr2 tgfbr2 slit3 slit3 smad4.1 smad4.1 slit2 slit2 nkx2-5 nkx2-5 tgfbr1 tgfbr1 zfpm1 zfpm1 BMPR2 BMPR2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
zfpm2GPI mannosyltransferase 1. (1151 aa)
sav1Salvador homolog 1 (Drosophila). (388 aa)
SMAD7Mothers against decapentaplegic homolog. (382 aa)
acvr1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (568 aa)
NSD2Nuclear receptor binding SET domain protein 2. (1308 aa)
tgfbr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (728 aa)
slit3ZXD family zinc finger C. (1519 aa)
smad4.1Mothers against decapentaplegic homolog. (579 aa)
slit2ATPase family, AAA domain containing 3A. (1564 aa)
nkx2-5Toll-like receptor12. (300 aa)
tgfbr1Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (501 aa)
zfpm1C-terminal Src kinase. (1214 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1053 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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