STRINGSTRING
tgfb1 tgfb1 gas6 gas6 ahsg ahsg fgf23.1 fgf23.1 fgf23.2 fgf23.2 ecm1 ecm1 gata1 gata1 rflnb rflnb bcor bcor grem1 grem1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (387 aa)
gas6Homeobox protein CDX-1. (672 aa)
ahsgAlpha-2-HS-glycoprotein. (331 aa)
fgf23.1Uncharacterized protein; Belongs to the heparin-binding growth factors family. (249 aa)
fgf23.2Leucine-rich repeat LGI family member 4; Belongs to the heparin-binding growth factors family. (254 aa)
ecm1O-phosphoseryl-tRNA(Sec) selenium transferase. (455 aa)
gata1GATA-binding protein 1. (363 aa)
rflnbBR serine/threonine kinase 2. (207 aa)
bcorRadial spoke head component 1. (1687 aa)
grem1Gremlin. (182 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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