STRINGSTRING
cmya5 cmya5 chp1 chp1 myoz1 myoz1 LOC100488346 LOC100488346 mtor mtor rcan1 rcan1 myoz2 myoz2 homer3 homer3 homer2 homer2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cmya5Uncharacterized protein. (1350 aa)
chp1Calcium binding protein P22. (193 aa)
myoz1Zinc finger protein 292. (311 aa)
LOC100488346Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1239 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2534 aa)
rcan1Uncharacterized LOC100145533. (235 aa)
myoz2Myozenin 2. (272 aa)
homer3Rh-associated glycoprotein. (359 aa)
homer2Lactate dehydrogenase B. (382 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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