STRINGSTRING
phc3-2 phc3-2 MALT1 MALT1 il27ra il27ra SMAD7 SMAD7 nfkbiz nfkbiz FOXP3 FOXP3 pcasp3 pcasp3 RC3H1 RC3H1 tbx21 tbx21 idi1-2 idi1-2 Zc3h12a Zc3h12a card9 card9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
phc3-2Polyhomeotic homolog 3. (298 aa)
MALT1MALT1 paracaspase. (799 aa)
il27raUncharacterized protein. (473 aa)
SMAD7Mothers against decapentaplegic homolog. (382 aa)
nfkbizLeucine rich repeat containing 75B. (652 aa)
FOXP3Forkhead box P3. (412 aa)
pcasp3Uncharacterized protein. (632 aa)
RC3H1Ring finger and CCCH-type domains 1. (1123 aa)
tbx21Leucine rich repeat containing 3B. (561 aa)
idi1-2Isopentenyl-diphosphate delta isomerase 1. (290 aa)
Zc3h12aC3H1-type domain-containing protein. (349 aa)
card9Polymerase (RNA) III (DNA directed) polypeptide G (32kD). (522 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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