(41 nodes) Regulation of transcription regulatory region DNA binding network (Xenopus tropicalis)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

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Your Input:
	ENSXETP00000033645	WD_REPEATS_REGION domain-containing protein. (374 aa)
	ddit3	Potassium channel, voltage gated subfamily E regulatory beta subunit 3. (209 aa)
	sri	Sorcin. (195 aa)
	ep300	Suv3 like RNA helicase. (2493 aa)
	msx1	Potassium channel, two pore domain subfamily K, member 18. (275 aa)
	pax6	Uncharacterized protein. (456 aa)
	gata1	GATA-binding protein 1. (363 aa)
	gga1-2	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1. (202 aa)
	elovl5-2	Elongation of very long chain fatty acids protein 5. (431 aa)
	LOC100158595	High choriolytic enzyme 2. (427 aa)
	bhlhe40-2	Protein zwilch homolog. (436 aa)
	LOC101734139	HYDIN, axonemal central pair apparatus protein. (467 aa)
	ANKRD33B	Ankyrin repeat domain 33B. (557 aa)
	niban2	Endoplasmic reticulum metallopeptidase 1. (924 aa)
	psen1	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (464 aa)
	fbxw7	Uncharacterized protein. (773 aa)
	tgfb1	Transforming growth factor beta; Belongs to the TGF-beta family. (387 aa)
	abca4-3	ATP binding cassette subfamily A member 4. (174 aa)
	zmpste24	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (472 aa)
	fbxw9	Exocyst complex component 5. (438 aa)
	tmtc3-2	Transmembrane and tetratricopeptide repeat containing 3. (152 aa)
	NSD1	Nuclear receptor binding SET domain protein 1. (2450 aa)
	tm4sf4-2	Transmembrane 4 L six family member 4. (375 aa)
	ENSXETP00000033698	Uncharacterized protein. (613 aa)
	LOC101734025	DEAD-box helicase 3 Y-linked. (462 aa)
	LOC108644804	WD_REPEATS_REGION domain-containing protein. (313 aa)
	DDRGK1	DDRGK domain containing 1. (240 aa)
	LOC100485335	Poly(A) polymerase alpha. (281 aa)
	DOT1L	Histone-lysine N-methyltransferase, H3 lysine-79 specific. (1402 aa)
	rb1	Uncharacterized protein. (914 aa)
	znf593	Zinc finger protein 593; Belongs to the ZNF593/BUD20 C2H2-type zinc-finger protein family. (128 aa)
	hand2	Hand2 protein. (210 aa)
	zc4h2	Uncharacterized protein. (224 aa)
	irf6-2	Uncharacterized protein. (171 aa)
	LOC100492804	Serine/arginine-rich splicing factor 5 alpha. (217 aa)
	ctnnb1	Dynactin subunit 5. (788 aa)
	gata3	Uncharacterized protein. (454 aa)
	REST	RE1 silencing transcription factor. (1442 aa)
	hand1	Glycogen synthase kinase 3 beta. (213 aa)
	gtf2b	Arginyl-tRNA synthetase 2, mitochondrial. (322 aa)
	rnf220.1	RING-type domain-containing protein. (604 aa)

Your Current Organism:

Xenopus tropicalis

NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100492804	zc4h2	ENSXETP00000040436	ENSXETP00000039586	Serine/arginine-rich splicing factor 5 alpha.	Uncharacterized protein.	0.428
ctnnb1	ep300	ENSXETP00000043290	ENSXETP00000003819	Dynactin subunit 5.	Suv3 like RNA helicase.	0.919
ctnnb1	psen1	ENSXETP00000043290	ENSXETP00000014752	Dynactin subunit 5.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.983
ctnnb1	tgfb1	ENSXETP00000043290	ENSXETP00000021234	Dynactin subunit 5.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.524
ep300	ctnnb1	ENSXETP00000003819	ENSXETP00000043290	Suv3 like RNA helicase.	Dynactin subunit 5.	0.919
ep300	gata1	ENSXETP00000003819	ENSXETP00000009610	Suv3 like RNA helicase.	GATA-binding protein 1.	0.648
ep300	gata3	ENSXETP00000003819	ENSXETP00000045135	Suv3 like RNA helicase.	Uncharacterized protein.	0.459
ep300	gtf2b	ENSXETP00000003819	ENSXETP00000052099	Suv3 like RNA helicase.	Arginyl-tRNA synthetase 2, mitochondrial.	0.720
ep300	rb1	ENSXETP00000003819	ENSXETP00000037442	Suv3 like RNA helicase.	Uncharacterized protein.	0.414
gata1	ep300	ENSXETP00000009610	ENSXETP00000003819	GATA-binding protein 1.	Suv3 like RNA helicase.	0.648
gata1	gata3	ENSXETP00000009610	ENSXETP00000045135	GATA-binding protein 1.	Uncharacterized protein.	0.403
gata3	ep300	ENSXETP00000045135	ENSXETP00000003819	Uncharacterized protein.	Suv3 like RNA helicase.	0.459
gata3	gata1	ENSXETP00000045135	ENSXETP00000009610	Uncharacterized protein.	GATA-binding protein 1.	0.403
gata3	hand2	ENSXETP00000045135	ENSXETP00000038596	Uncharacterized protein.	Hand2 protein.	0.520
gtf2b	ep300	ENSXETP00000052099	ENSXETP00000003819	Arginyl-tRNA synthetase 2, mitochondrial.	Suv3 like RNA helicase.	0.720
hand2	gata3	ENSXETP00000038596	ENSXETP00000045135	Hand2 protein.	Uncharacterized protein.	0.520
irf6-2	zc4h2	ENSXETP00000040424	ENSXETP00000039586	Uncharacterized protein.	Uncharacterized protein.	0.428
psen1	ctnnb1	ENSXETP00000014752	ENSXETP00000043290	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Dynactin subunit 5.	0.983
rb1	ep300	ENSXETP00000037442	ENSXETP00000003819	Uncharacterized protein.	Suv3 like RNA helicase.	0.414
rnf220.1	zc4h2	ENSXETP00000052647	ENSXETP00000039586	RING-type domain-containing protein.	Uncharacterized protein.	0.567

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