STRINGSTRING
atp13a-like atp13a-like ehd1 ehd1 atp13a4 atp13a4 atp13a5 atp13a5 ehd4 ehd4 neu3 neu3 lztr1 lztr1 ATP13A3 ATP13A3 lamp5 lamp5 ehd2 ehd2 cmtm6 cmtm6 ras-dva1 ras-dva1 nsg1 nsg1 LOC100489013 LOC100489013 scamp2 scamp2 LOC100495031 LOC100495031 ehd3 ehd3 rap2b rap2b zfyve27 zfyve27 scamp1 scamp1 INPPL1 INPPL1 LOC100494846 LOC100494846 ENSXETP00000041053 ENSXETP00000041053 LOC100496476 LOC100496476 micall1 micall1 LOC101733684 LOC101733684 LOC100497259 LOC100497259 ndrg1 ndrg1 rap2a rap2a rap2c rap2c cftr cftr grpel2-2 grpel2-2 spdef spdef
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atp13a-likeCation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1139 aa)
ehd1Nuclear factor, erythroid 2 like 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (534 aa)
atp13a4Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1203 aa)
atp13a5Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1194 aa)
ehd4Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (537 aa)
neu3Treacher Collins-Franceschetti syndrome 1. (397 aa)
lztr1Uncharacterized protein. (804 aa)
ATP13A3Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1247 aa)
lamp5Lysosome-associated membrane glycoprotein 5; Plays a role in short-term synaptic plasticity in a subset of GABAergic neurons in the brain. (276 aa)
ehd2MGC107790 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (538 aa)
cmtm6Uncharacterized protein. (172 aa)
ras-dva1Ras-related protein ras-dva. (211 aa)
nsg1DDB1- and CUL4-associated factor 13. (185 aa)
LOC100489013Mitotic-spindle organizing protein 2B. (835 aa)
scamp2Secretory carrier-associated membrane protein. (330 aa)
LOC100495031Uncharacterized protein. (779 aa)
ehd3Dual specificity tyrosine phosphorylation regulated kinase 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (551 aa)
rap2bRAP2B, member of RAS oncogene family. (182 aa)
zfyve27Cell division cycle associated 4. (445 aa)
scamp1Secretory carrier-associated membrane protein. (355 aa)
INPPL1Inositol polyphosphate phosphatase like 1. (925 aa)
LOC100494846Golgi membrane protein 1; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1102 aa)
ENSXETP00000041053Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1096 aa)
LOC100496476Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1205 aa)
micall1Tetratricopeptide repeat domain 14. (775 aa)
LOC101733684Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1175 aa)
LOC100497259Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1171 aa)
ndrg1Protein NDRG1; May be involved in pronephros development, after specification of the pronephros. (399 aa)
rap2aRAP2A, member of RAS oncogene family. (183 aa)
rap2cRAP2C, member of RAS oncogene family. (183 aa)
cftrCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1493 aa)
grpel2-2GrpE like 2, mitochondrial. (254 aa)
spdefSAM pointed domain containing ets transcription factor. (317 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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